RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MTDHQ86UE4 582 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 DCBLD1Q8N8Z6 715 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 GPR156Q8NFN8 814 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ABHD11Q8NFV4 315 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 MAELQ96JY0 434 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 AIF1LQ9BQI0 150 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 XKR8Q9H6D3 395 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 MRPS30Q9NP92 439 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 NMRK1Q9NWW6 199 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 TIMM22Q9Y584 194 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 KMT2EQ8IZD2 1858 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 TDRD6O60522 2096 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 LILRA5A6NI73 299 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 RHPN2P1A8MT19 583 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 NUDT21O43809 227 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 PCSK2P16519 638 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 MPLP40238 635 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 EPHA4P54764 986 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 BNC1Q01954 994 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 BNIP1Q12981 228 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 TUBB3Q13509 450 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 SUZ12Q15022 739 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 MED27Q6P2C8 311 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 CLNKQ7Z7G1 428 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 SLC25A45Q8N413 288 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 C2orf73Q8N5S3 287 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 OR2A1Q8NGT9 310 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 SELENOMQ8WWX9 145 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 KCNA7Q96RP8 456 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ACAT2Q9BWD1 397 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 EVA1BQ9NVM1 165 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 UCKL1Q9NWZ5 548 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 SNX7Q9UNH6 387 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 PI4KAP42356 2102 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 A0A1B0GTL3 188 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 PIP5K1BO14986 540 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 NOBOXO60393 691 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 SERPINA6P08185 405 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 HSD3B1P14060 373 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 GLB1P16278 677 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 HSD3B2P26439 372 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 GSTM2P28161 218 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 BNIP3Q12983 259 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
VAPB-202ENST00000395802 IMPG1Q17R60 797 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 NXNQ6DKJ4 435 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 TRIM46Q7Z4K8 759 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 LMNTD1Q8N9Z9 388 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 TTLQ8NG68 377 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 SAP25Q8TEE9 199 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 USP7Q93009 1102 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 TUBGCP3Q96CW5 907 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
VAPB-202ENST00000395802 BRF2Q9HAW0 419 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 TNFRSF12AQ9NP84 129 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 TMEM184CQ9NVA4 438 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 HRASLS2Q9NWW9 162 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 ZNF490Q9ULM2 529 aaPredicted RBP13.19□□□□□ -0.3
VAPB-202ENST00000395802 TSC22D4Q9Y3Q8 395 aa13.19□□□□□ -0.3
VAPB-202ENST00000395802 GSAPA4D1B5 854 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR6C74A6NCV1 312 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 MANBAO00462 879 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 UBXN7O94888 489 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 CDH1P12830 882 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 AMD1P17707 334 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 EPHA3P29320 983 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 GPR3P46089 330 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 CORO7P57737 925 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 MAD2L1Q13257 205 aaPredicted RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 LPAL2Q16609 132 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 INAVAQ3KP66 663 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 VWA5B1Q5TIE3 1220 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ADGRF3Q8IZF5 1079 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR2L3Q8NG85 312 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PRR11Q96HE9 360 aaPredicted RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 METTL2AQ96IZ6 378 aaKnown RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 PPP3R2Q96LZ3 170 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 NMUR2Q9GZQ4 415 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR5K3A6NET4 321 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms