RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CFAP36Q96G28 342 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 SNF8Q96H20 258 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 CABS1Q96KC9 395 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 HIST1H2AHQ96KK5 128 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 NDNQ99608 321 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 HIST1H2AJQ99878 128 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 H2AFJQ9BTM1 129 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 ZNF304Q9HCX3 659 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 SLC6A20Q9NP91 592 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 ATP13A2Q9NQ11 1180 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 SLC22A11Q9NSA0 550 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 MED16Q9Y2X0 877 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 BSNQ9UPA5 3926 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 H0YGG7 62 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 AGPSO00116 658 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 TXNDC9O14530 226 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 BANF1O75531 89 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 IPO13O94829 963 aaKnown RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 UMODP07911 640 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 MMP11P24347 488 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 HRH2P25021 359 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 ELK3P41970 407 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 EMP3P54852 163 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 MLLT10P55197 1068 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 ARF3P61204 181 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 RAPSNQ13702 412 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 NKG7Q16617 165 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 MSS51Q4VC12 460 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 VWA5B1Q5TIE3 1220 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 CYHR1Q6ZMK1 362 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 CSNK1A1LQ8N752 337 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 EEF1AKMT1Q8WVE0 214 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 TM9SF4Q92544 642 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 CCDC138Q96M89 665 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 NUDT9Q9BW91 350 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 SLC26A1Q9H2B4 701 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 SLAMF7Q9NQ25 335 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 CCDC177Q9NQR7 707 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-205ENST00000395794 CHMP2BQ9UQN3 213 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 MAU2Q9Y6X3 613 aa13.13□□□□□ -0.31
CXCL12-205ENST00000395794 SLC16A5O15375 505 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 TTI1O43156 1089 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 CNOT3O75175 753 aaKnown RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 AHSGP02765 367 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 ANXA5P08758 320 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 FBLP22087 321 aaKnown RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 IVDP26440 423 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 ITGA8P53708 1063 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 IL2P60568 153 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 YBX1P67809 324 aaKnown RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 RELAQ04206 551 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 AIMP2Q13155 320 aaKnown RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 SP140Q13342 867 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 MYBPC3Q14896 1274 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 RBBP7Q16576 425 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 NADK2Q4G0N4 442 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 PAQR3Q6TCH7 311 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 SHISA6Q6ZSJ9 500 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 GALNT7Q86SF2 657 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 IGDCC3Q8IVU1 814 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 CNTN4Q8IWV2 1026 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 GPATCH11Q8N954 259 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 MIEF2Q96C03 454 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 LINGO1Q96FE5 620 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 SMAD5Q99717 465 aaKnown RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 TRIM54Q9BYV2 358 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 TRIM31Q9BZY9 425 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 SOX17Q9H6I2 414 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 PARVBQ9HBI1 364 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 SEMA3GQ9NS98 782 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 CTSFQ9UBX1 484 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 CORO1CQ9ULV4 474 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-205ENST00000395794 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
CXCL12-205ENST00000395794 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 NRP2O60462 931 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 VPS4BO75351 444 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 SEC31AO94979 1220 aaKnown RBP13.11□□□□□ -0.31
CXCL12-205ENST00000395794 CCND1P24385 295 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 ITGA3P26006 1051 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
CXCL12-205ENST00000395794 IMPA1P29218 277 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 FOXL2P58012 376 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 PRTGQ2VWP7 1150 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms