RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OR2A25A4D2G3 310 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 ZNHIT1O43257 154 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 SLCO2B1O94956 709 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 GOT2P00505 430 aaKnown RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 HEXBP07686 556 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 TRIM14Q14142 442 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 SYT16Q17RD7 645 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 PARP6Q2NL67 630 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 AADACL2Q6P093 401 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 FBXO42Q6P3S6 717 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 SPPL2CQ8IUH8 684 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 ZC3H7AQ8IWR0 971 aaKnown RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 THAP3Q8WTV1 239 aaPredicted RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 ASZ1Q8WWH4 475 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 HDAC10Q969S8 669 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 CABS1Q96KC9 395 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 ALS2CR12Q96Q35 445 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 ZFYVE21Q9BQ24 234 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 TREX2Q9BQ50 279 aaPredicted RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 CARD6Q9BX69 1037 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 RAB11FIP5Q9BXF6 653 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 STMN3Q9NZ72 180 aa15.01□□□□□ -0.01
SNCA-205ENST00000394991 RUVBL2Q9Y230 463 aaKnown RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 RUVBL1Q9Y265 456 aaKnown RBP15.01□□□□□ -0.01
SNCA-205ENST00000394991 NIPBLQ6KC79 2804 aaeCLIP15.01□□□□□ -0.01
SNCA-205ENST00000394991 A0A0U1RQJ8 604 aa15□□□□□ -0.01
SNCA-205ENST00000394991 FAM227AF5H4B4 570 aa15□□□□□ -0.01
SNCA-205ENST00000394991 H0YGG7 62 aa15□□□□□ -0.01
SNCA-205ENST00000394991 MFAP3LO75121 409 aa15□□□□□ -0.01
SNCA-205ENST00000394991 APOA4P06727 396 aa15□□□□□ -0.01
SNCA-205ENST00000394991 TPM1P09493 284 aa15□□□□□ -0.01
SNCA-205ENST00000394991 ERVK-10P10266 1014 aa15□□□□□ -0.01
SNCA-205ENST00000394991 CTNNA2P26232 953 aa15□□□□□ -0.01
SNCA-205ENST00000394991 AOAHP28039 575 aa15□□□□□ -0.01
SNCA-205ENST00000394991 SLC26A3P40879 764 aa15□□□□□ -0.01
SNCA-205ENST00000394991 ST13P50502 369 aaKnown RBP15□□□□□ -0.01
SNCA-205ENST00000394991 COPS2P61201 443 aa15□□□□□ -0.01
SNCA-205ENST00000394991 ARF3P61204 181 aaPredicted RBP15□□□□□ -0.01
SNCA-205ENST00000394991 CSNK1G2P78368 415 aa15□□□□□ -0.01
SNCA-205ENST00000394991 HKDC1Q2TB90 917 aa15□□□□□ -0.01
SNCA-205ENST00000394991 C11orf63Q6NUN7 778 aa15□□□□□ -0.01
SNCA-205ENST00000394991 AFTPHQ6ULP2 937 aa15□□□□□ -0.01
SNCA-205ENST00000394991 MEX3BQ6ZN04 569 aaKnown RBP15□□□□□ -0.01
SNCA-205ENST00000394991 VSTM4Q8IW00 320 aa15□□□□□ -0.01
SNCA-205ENST00000394991 ARHGEF39Q8N4T4 335 aa15□□□□□ -0.01
SNCA-205ENST00000394991 MDS2Q8NDY4 140 aa15□□□□□ -0.01
SNCA-205ENST00000394991 HMGCLL1Q8TB92 370 aa15□□□□□ -0.01
SNCA-205ENST00000394991 SIGLEC12Q96PQ1 595 aa15□□□□□ -0.01
SNCA-205ENST00000394991 TGIF2Q9GZN2 237 aa15□□□□□ -0.01
SNCA-205ENST00000394991 CDC14AQ9UNH5 594 aa15□□□□□ -0.01
SNCA-205ENST00000394991 EFR3BQ9Y2G0 817 aa15□□□□□ -0.01
SNCA-205ENST00000394991 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15□□□□□ -0.01
SNCA-205ENST00000394991 AKAP6Q13023 2319 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 RCCD1A6NED2 376 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 NPIPA5E9PKD4 350 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 FOXS1O43638 330 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 SEC24DO94855 1032 aaPredicted RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 C1orf105O95561 183 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 PTPN7P35236 360 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 EMP3P54852 163 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 SNRPNP63162 240 aaKnown RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 FASTKQ14296 549 aaKnown RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 LONRF1Q17RB8 773 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 FCRLBQ6BAA4 426 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 CHERPQ8IWX8 916 aaKnown RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 SHISA5Q8N114 240 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 BEST3Q8N1M1 668 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 TAB3Q8N5C8 712 aaPredicted RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 OR52K1Q8NGK4 314 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 RAD51AP1Q96B01 352 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 MVB12AQ96EY5 273 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 MMABQ96EY8 250 aaPredicted RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 ZNF778Q96MU6 729 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 TMEM121Q9BTD3 319 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 DPH7Q9BTV6 452 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 TUBB6Q9BUF5 446 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 GPAMQ9HCL2 828 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 MKKSQ9NPJ1 570 aaPredicted RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 NPIPA1Q9UND3 350 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 R3HDM2Q9Y2K5 976 aaKnown RBP14.99□□□□□ -0.01
SNCA-205ENST00000394991 PCDHGB6Q9Y5F9 930 aa14.99□□□□□ -0.01
SNCA-205ENST00000394991 PRRC2AP48634 2157 aaKnown RBP14.98□□□□□ -0.01
SNCA-205ENST00000394991 IGHV3-20A0A0C4DH32 117 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 ASPDHA6ND91 283 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 A8MUI8 341 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 F8W8V4 182 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 ADAM10O14672 748 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 PRPF4O43172 522 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNCA-205ENST00000394991 MYBL2P10244 700 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 ICAM2P13598 275 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 CTNNA1P35221 906 aaKnown RBP14.98□□□□□ -0.01
SNCA-205ENST00000394991 GDF10P55107 478 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 AP2B1P63010 937 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 MAT1AQ00266 395 aaKnown RBP14.98□□□□□ -0.01
SNCA-205ENST00000394991 ALDH6A1Q02252 535 aaKnown RBP14.98□□□□□ -0.01
SNCA-205ENST00000394991 TUBA3CQ13748 450 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 TMED2Q15363 201 aa14.98□□□□□ -0.01
SNCA-205ENST00000394991 KRTCAP3Q53RY4 240 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms