RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PRTGQ2VWP7 1150 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 BNC2Q6ZN30 1099 aaPredicted RBP20.09■□□□□ 0.81
TRAF4-203ENST00000394925 PEX26Q7Z412 305 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 ZNF808Q8N4W9 903 aaPredicted RBP20.09■□□□□ 0.81
TRAF4-203ENST00000394925 UBL4BQ8N7F7 174 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 MRFAP1L1Q96HT8 127 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 PANX3Q96QZ0 392 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 ZFYVE21Q9BQ24 234 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 DPH7Q9BTV6 452 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 RIC8BQ9NVN3 520 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 ABI3Q9P2A4 366 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 SEC14L3Q9UDX4 400 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 TSR3Q9UJK0 312 aaKnown RBP20.09■□□□□ 0.81
TRAF4-203ENST00000394925 CDC14AQ9UNH5 594 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 MRFAP1Q9Y605 127 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 HEATR5BQ9P2D3 2071 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 OR2A25A4D2G3 310 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 BTNL10A8MVZ5 291 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 CD3EAPO15446 510 aaKnown RBP20.08■□□□□ 0.81
TRAF4-203ENST00000394925 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.81
TRAF4-203ENST00000394925 CRYABP02511 175 aaKnown RBP20.08■□□□□ 0.81
TRAF4-203ENST00000394925 ITGAMP11215 1152 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 CMPK1P30085 196 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 PTGER4P35408 488 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 FDFT1P37268 417 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 TTPAP49638 278 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 RIPPLY3P57055 190 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 DSG2Q14126 1118 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 HIBCHQ6NVY1 386 aaPredicted RBP20.08■□□□□ 0.81
TRAF4-203ENST00000394925 OTOAQ7RTW8 1153 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 AMER2Q8N7J2 671 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 ATG4AQ8WYN0 398 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 FOPNLQ96NB1 174 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 P2RY12Q9H244 342 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 CHST11Q9NPF2 352 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 GNPTGQ9UJJ9 305 aa20.08■□□□□ 0.81
TRAF4-203ENST00000394925 REXO2Q9Y3B8 237 aaKnown RBP20.08■□□□□ 0.81
TRAF4-203ENST00000394925 A0A1W2PQ72 361 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 KPNA5O15131 536 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 PRPF4O43172 522 aaKnown RBP eCLIP20.07■□□□□ 0.81e-6■□□□□ 9.2
TRAF4-203ENST00000394925 IFNB1P01574 187 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 COX6B1P14854 86 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 CCNFP41002 786 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 CA7P43166 264 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 ZNF630Q2M218 657 aaPredicted RBP20.07■□□□□ 0.8
TRAF4-203ENST00000394925 MTFR2Q6P444 385 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 RIPOR1Q6ZS17 1223 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 PPHLN1Q8NEY8 458 aaKnown RBP20.07■□□□□ 0.8
TRAF4-203ENST00000394925 DNAJB8Q8NHS0 232 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 SUN3Q8TAQ9 357 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 MMABQ96EY8 250 aaPredicted RBP20.07■□□□□ 0.8
TRAF4-203ENST00000394925 LURAP1Q96LR2 239 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 TRIM5Q9C035 493 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 CHRAC1Q9NRG0 131 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 C14orf105Q9NVL8 296 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 RUVBL1Q9Y265 456 aaKnown RBP20.07■□□□□ 0.8
TRAF4-203ENST00000394925 HIVEP1P15822 2718 aa20.07■□□□□ 0.8
TRAF4-203ENST00000394925 STIP1P31948 543 aaKnown RBP20.06■□□□□ 0.8
TRAF4-203ENST00000394925 EMP3P54852 163 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 NAA25Q14CX7 972 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 HKDC1Q2TB90 917 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 RPTNQ6XPR3 784 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 PRUNE1Q86TP1 453 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 CSNK1A1LQ8N752 337 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 MAGEC3Q8TD91 643 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 PEX13Q92968 403 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 MVB12AQ96EY5 273 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 RNF32Q9H0A6 362 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 SYNPO2LQ9H987 977 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 RAB6BQ9NRW1 208 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 SPATA7Q9P0W8 599 aa20.06■□□□□ 0.8
TRAF4-203ENST00000394925 SETD2Q9BYW2 2564 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 LOC102723996A0A087X1L8 192 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 OR5H15A6NDH6 313 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 PRAMEF2O60811 474 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 VPS26AO75436 327 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 NDUFS3O75489 264 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 FTCDO95954 541 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 ANXA5P08758 320 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 SLC26A3P40879 764 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 EIF3BP55884 814 aaKnown RBP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 PMP22Q01453 160 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 RBPJQ06330 500 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 TSTA3Q13630 321 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 PCOLCEQ15113 449 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 SYT16Q17RD7 645 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 ABHD17BQ5VST6 288 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 SUSD1Q6UWL2 747 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 AMER3Q8N944 861 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 ACRBPQ8NEB7 543 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 ZNF700Q9H0M5 742 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 MRPS30Q9NP92 439 aaKnown RBP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 MKKSQ9NPJ1 570 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-203ENST00000394925 STMN3Q9NZ72 180 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 MKL2Q9ULH7 1088 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 SCN2AQ99250 2005 aa20.05■□□□□ 0.8
TRAF4-203ENST00000394925 A0A0U1RQJ8 604 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 MIF4GDA9UHW6 222 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms