RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KCNE1BA0A087WTH5 132 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 GLYATL1P3A0A0U1RQE8 302 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 RFXANKO14593 260 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 SEMG1P04279 462 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ANXA5P08758 320 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 FUT4P22083 530 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 MAD2L1BPQ15013 274 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ZXDCQ2QGD7 858 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TTLL9Q3SXZ7 439 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 OR4F3Q6IEY1 312 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TTC29Q8NA56 475 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 MINDY2Q8NBR6 621 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 PHF10Q8WUB8 498 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 APIPQ96GX9 242 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 HHIPQ96QV1 700 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 PSD2Q9BQI7 771 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 KLF16Q9BXK1 252 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ACOT13Q9NPJ3 140 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 AASDHPPTQ9NRN7 309 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 NDRG4Q9ULP0 352 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 WDR37Q9Y2I8 494 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TRBC1P01850 177 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 HMGA1P17096 107 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 FPR1P21462 350 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 DNAJA1P31689 397 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 GKP32189 559 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 HNF1BP35680 557 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 EIF2B2P49770 351 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 AP1S1P61966 158 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 VLDLRP98155 873 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 HIST2H2ACQ16777 129 aaPredicted RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 LYPLAL1Q5VWZ2 237 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 ZCCHC8Q6NZY4 707 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 ANKS3Q6ZW76 656 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 SERPINA11Q86U17 422 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 C7orf61Q8IZ16 206 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 CADM3Q8N126 398 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 ZNF540Q8NDQ6 660 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 FBXO22Q8NEZ5 403 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 WFDC5Q8TCV5 224 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 OVCA2Q8WZ82 227 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 YME1L1Q96TA2 773 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 APOL4Q9BPW4 351 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 HTATIP2Q9BUP3 242 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 GIN1Q9NXP7 522 aa17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 PDP1Q9P0J1 537 aaPredicted RBP17.81■□□□□ 0.44
PCDHA1-202ENST00000394633 C2orf78A6NCI8 922 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 A8MX80 341 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 RGS10O43665 173 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 FAM20BO75063 409 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 COQ9O75208 318 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 CSKP41240 450 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 SERPINB10P48595 397 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 RPIAP49247 311 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ARHGDIAP52565 204 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 VTCN1Q7Z7D3 282 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ZZZ3Q8IYH5 903 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ELMOD1Q8N336 334 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 CMTM7Q96FZ5 175 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ELOVL6Q9H5J4 265 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ARL15Q9NXU5 204 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 TTC34A8MYJ7 566 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 AQP9O43315 295 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 PRPH2P23942 346 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 TGFBR1P36897 503 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ST13P50502 369 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 DNASE1L3Q13609 305 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 CCDC71Q8IV32 467 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 NXPE1Q8N323 547 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 NELL1Q92832 810 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 RPL3LQ92901 407 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 UBE2FQ969M7 185 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ERLEC1Q96DZ1 483 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ALG14Q96F25 216 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ASPSCR1Q9BZE9 553 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 ABCG8Q9H221 673 aa17.8■□□□□ 0.44
PCDHA1-202ENST00000394633 EVPLLA8MZ36 301 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SMAD6O43541 496 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 FABP3P05413 133 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 ALOX5P09917 674 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 GRK3P35626 688 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 KRT20P35900 424 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 FPGSQ05932 587 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 VMACQ2NL98 169 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 INAVAQ3KP66 663 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 AGAP7PQ5VUJ5 663 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 PGBD3Q8N328 593 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SVOPQ8N4V2 548 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SLIRPQ9GZT3 109 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 KCTD5Q9NXV2 234 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 TRPM5Q9NZQ8 1165 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 AFF4Q9UHB7 1163 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SNX6Q9UNH7 406 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 REV3LO60673 3130 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 CLIC1O00299 241 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 CNOT3O75175 753 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 KCNK5O95279 499 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 ENGP17813 658 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms