RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LARP4Q71RC2 724 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTN4-205ENST00000394609 MILR1Q7Z6M3 343 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 SLC22A15Q8IZD6 547 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 FBXW8Q8N3Y1 598 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 LMNTD1Q8N9Z9 388 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 TP53I13Q8NBR0 393 aaPredicted RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 ZFP28Q8NHY6 868 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 HMGB4Q8WW32 186 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 NMD3Q96D46 503 aaKnown RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 TEX101Q9BY14 249 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 EPHX3Q9H6B9 360 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 WDR26Q9H7D7 661 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 TUBA8Q9NY65 449 aaPredicted RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 UBAP1Q9NZ09 502 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 POLG2Q9UHN1 485 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 CA14Q9ULX7 337 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 SLC22A14Q9Y267 594 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 RNF11Q9Y3C5 154 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 DENND4AQ7Z401 1863 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ZNF106Q9H2Y7 1883 aaKnown RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 VCANP13611 3396 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 MYO10Q9HD67 2058 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PLXNB3Q9ULL4 1909 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 DYTNA2CJ06 578 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ADARB2-AS1A8MUL3 147 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC16A5O15375 505 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 LATO43561 262 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PSIP1O75475 530 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 WDR47O94967 919 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CHEK2O96017 543 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 OTCP00480 354 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 FUCA1P04066 466 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ENO2P09104 434 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 GSTM1P09488 218 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SRFP11831 508 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 COX4I1P13073 169 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 HGFP14210 728 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ETS2P15036 469 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 GLULP15104 373 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 EPB42P16452 691 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 EPORP19235 508 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ITPKAP23677 461 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PEX2P28328 305 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TTKP33981 857 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TRIM23P36406 574 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ALDH3B2P48448 385 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 HTR6P50406 440 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TPMTP51580 245 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PKNOX1P55347 436 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CLDN2P57739 230 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NAA20P61599 178 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC25A3Q00325 362 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 GSTM4Q03013 218 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TRAF3Q13114 568 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SP140Q13342 867 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TRIP10Q15642 601 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 FBXO43Q4G163 708 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 EOGTQ5NDL2 527 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NEK5Q6P3R8 708 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 IL27RAQ6UWB1 636 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NEK10Q6ZWH5 1172 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 C11orf96Q7Z7L8 435 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SYT9Q86SS6 491 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 AMZ2Q86W34 360 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SNX32Q86XE0 403 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CPSF7Q8N684 471 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 OR2T11Q8NH01 316 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 OR2L2Q8NH16 312 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 HM13Q8TCT9 377 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC26A7Q8TE54 656 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 FAM131CQ96AQ9 280 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 MTFMTQ96DP5 389 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC45A3Q96JT2 553 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ZNF514Q96K75 400 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 GUCD1Q96NT3 240 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 RTKNQ9BST9 563 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC32A1Q9H598 525 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ZNF385DQ9H6B1 395 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 FBRSQ9HAH7 460 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 FARSBQ9NSD9 589 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 MRGBPQ9NV56 204 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 C2orf42Q9NWW7 574 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SCHIP1Q9P0W5 487 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 MOSPD1Q9UJG1 213 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 GPR34Q9UPC5 381 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 POMPQ9Y244 141 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NCKAP1Q9Y2A7 1128 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CA5BQ9Y2D0 317 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 MGAT4DA6NG13 374 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TRIM64CA6NLI5 447 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 C9JVG2 144 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 H0Y8X5 98 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 AIM2O14862 343 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 C1orf105O95561 183 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC16A8O95907 504 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CATP04040 527 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 EIF2S1P05198 315 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 ALDOCP09972 364 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms