RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MAPK1P28482 360 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 NUDT1P36639 197 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 MRPL19P49406 292 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 RAB28P51157 221 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PSME3P61289 254 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ILF3Q12906 894 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■□□□□ 9.3
TDP1-203ENST00000393454 CSTF3Q12996 717 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 LAPTM5Q13571 262 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PTGR1Q14914 329 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 RBBP5Q15291 538 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 SNCBQ16143 134 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ADNP2Q6IQ32 1131 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 NET1Q7Z628 596 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 HPS6Q86YV9 775 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SLC22A18ASQ8N1D0 253 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 FBXW8Q8N3Y1 598 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PJA1Q8NG27 643 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 OR52E1Q8NGJ3 308 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CLHC1Q8NHS4 586 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 HUS1BQ8NHY5 278 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PROKR1Q8TCW9 393 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 WDR60Q8WVS4 1066 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 JPH3Q8WXH2 748 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 CXorf40BQ96DE9 158 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 APIPQ96GX9 242 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SLC6A18Q96N87 628 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 DPY30Q9C005 99 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CHRDQ9H2X0 955 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 THEGQ9P2T0 379 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 VPS29Q9UBQ0 182 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 MUTYHQ9UIF7 546 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CROTQ9UKG9 612 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SIT1Q9Y3P8 196 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 GON4LQ3T8J9 2241 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 A0A1W2PP18 115 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SERTM1A2A2V5 107 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MAGEB17A8MXT2 336 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MAP3K13O43283 966 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MYO1DO94832 1006 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SORBS2O94875 1100 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 BCKDHAP12694 445 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CTSEP14091 401 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PSMB5P28074 263 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 IL12AP29459 219 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ERFP50548 548 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RPS13P62277 151 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 YBX1P67809 324 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 PHEXP78562 749 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RPL6Q02878 288 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 ZNF33BQ06732 778 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RIPK1Q13546 671 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TIGD2Q4W5G0 525 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ABRAXAS1Q6UWZ7 409 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RETREG3Q86VR2 466 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 KRT78Q8N1N4 520 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RNF148Q8N7C7 305 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 LINC01555Q8NAE3 123 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 NUDT8Q8WV74 236 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 WDR34Q96EX3 536 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MENTQ9BUN1 341 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RAB11FIP5Q9BXF6 653 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 EHD1Q9H4M9 534 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CAAP1Q9H8G2 361 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TRNAU1APQ9NX07 287 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 PRPF19Q9UMS4 504 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 DLGAP4Q9Y2H0 992 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SLCO1B1Q9Y6L6 691 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 FANCMQ8IYD8 2048 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 C10orf142B7Z368 130 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 H7BY64 318 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PRPS2P11908 318 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 HSD3B1P14060 373 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 AMD1P17707 334 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PRPH2P23942 346 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 HSD3B2P26439 372 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MAOBP27338 520 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PKLRP30613 574 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CXCL12P48061 93 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CCR8P51685 355 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 DGKQP52824 942 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ACSM2AQ08AH3 577 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 NFYCQ13952 458 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RCAN2Q14206 197 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 FZD2Q14332 565 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 KIAA0040Q15053 153 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CCDC6Q16204 474 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TRMT5Q32P41 509 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 USP39Q53GS9 565 aaKnown RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 ACSM2BQ68CK6 577 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 NOXRED1Q6NXP6 359 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PGM2L1Q6PCE3 622 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TMIGD1Q6UXZ0 262 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ADCK2Q7Z695 626 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TAF8Q7Z7C8 310 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 GJD3Q8N144 294 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms