RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RNF130Q86XS8 419 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 GTPBP2Q9BX10 602 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 LIN7BQ9HAP6 207 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ABCB8Q9NUT2 735 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 NDFIP2Q9NV92 336 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 PCDHGA6Q9Y5G7 932 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CLCA1A8K7I4 914 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ARVCFO00192 962 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 PLD2O14939 933 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 KERAO60938 352 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 BEST1O76090 585 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ZNF250P15622 560 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 TALDO1P37837 337 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ARSDP51689 593 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 DAB2P98082 770 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 MGAT3Q09327 533 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 RUNDC3AQ59EK9 446 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SLC35F1Q5T1Q4 408 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 TIGD7Q6NT04 549 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 C19orf48Q6RUI8 117 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ALKAL1Q6UXT8 129 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 GCNT7Q6ZNI0 430 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 PHACTR4Q8IZ21 702 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 TRPV1Q8NER1 839 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SLC13A3Q8WWT9 602 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 BBS2Q9BXC9 721 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 MIOSQ9NXC5 875 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 OR12D3Q9UGF7 316 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 OR51F1A6NGY5 319 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 KCNJ13O60928 360 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 VIPP01282 170 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 CSF2P04141 144 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 STSP08842 583 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 FPR1P21462 350 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 ALAS2P22557 587 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 KIR2DL3P43628 341 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SOX9P48436 509 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 AGTR2P50052 363 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SUOXP51687 545 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 UBXN11Q5T124 520 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 FAM171A1Q5VUB5 890 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 KIAA1191Q96A73 305 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 COL21A1Q96P44 957 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 TTPALQ9BTX7 342 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 BARHL1Q9BZE3 327 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 MFSD1Q9H3U5 465 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 RNF186Q9NXI6 227 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 GALPQ9UBC7 116 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SPASTQ9UBP0 616 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 IKZF3Q9UKT9 509 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 AP3M1Q9Y2T2 418 aa14.25□□□□□ -0.13
VPS9D1-201ENST00000389386 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 MBLAC1A4D2B0 266 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 SLC35F4A4IF30 521 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 A8MX80 341 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 HSMCR30P0CW71 290 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 CPN2P22792 545 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 OLR1P78380 273 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 HOXC5Q00444 222 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 SETMARQ53H47 684 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 TMEM65Q6PI78 240 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 CALHM3Q86XJ0 350 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 TMC8Q8IU68 726 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 STAG3L4Q8TBR4 150 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 LPPQ93052 612 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 HRASLS5Q96KN8 279 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 OLA1Q9NTK5 396 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 SIRT5Q9NXA8 310 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 PCTPQ9UKL6 214 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 RNF112Q9ULX5 631 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 UBQLN1Q9UMX0 589 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 KCNE2Q9Y6J6 123 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 EFCAB10A6NFE3 127 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 SEC14L5O43304 696 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 ECI2O75521 394 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 B3GALNT1O75752 331 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 MLYCDO95822 493 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 HLA-DQB2P05538 268 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 ITGB1P05556 798 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 GZMMP51124 257 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 WNT3AP56704 352 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 RBBP7Q16576 425 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 ZBTB37Q5TC79 503 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 ATCAYQ86WG3 371 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 PLPP6Q8IY26 295 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 C10orf111Q8N326 155 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 ATG16L2Q8NAA4 619 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 NLGN4YQ8NFZ3 816 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 POP5Q969H6 163 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 TM9SF2Q99805 663 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 C1orf109Q9NX04 203 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 TLR6Q9Y2C9 796 aa14.24□□□□□ -0.13
VPS9D1-201ENST00000389386 TRIM3O75382 744 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-201ENST00000389386 SLC22A5O76082 557 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms