RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 C15orf62A8K5M9 175 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 K7EQZ3 153 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SEC14L5O43304 696 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 KLK8O60259 260 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SIX3O95343 332 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 GLAP06280 429 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 DLATP10515 647 aaKnown RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 LYL1P12980 280 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 VCAM1P19320 739 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 EFNA1P20827 205 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ADSSP30520 456 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 TKTL1P51854 596 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SUCLG1P53597 346 aaKnown RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 CDH15P55291 814 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ITGA7Q13683 1181 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ABCB5Q2M3G0 1257 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SLC5A9Q2M3M2 681 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 TMEM44Q2T9K0 475 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 KLHL26Q53HC5 615 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SPOUT1Q5T280 376 aaKnown RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 GGNBP1Q5YKI7 109 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ADNP2Q6IQ32 1131 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 LIN54Q6MZP7 749 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 SLC39A4Q6P5W5 647 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 H2BFWTQ7Z2G1 175 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 RPAP2Q8IXW5 612 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 RCOR2Q8IZ40 523 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 KIRREL3Q8IZU9 778 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 GHDCQ8N2G8 530 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 OR6F1Q8NGZ6 308 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 FAM110BQ8TC76 370 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ACER1Q8TDN7 264 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 C1GALT1C1Q96EU7 318 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 TSNARE1Q96NA8 513 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 OCR1Q9BZK8 76 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 IMUPQ9GZP8 106 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 PCDHAC1Q9H158 963 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 NANOGQ9H9S0 305 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 PKD2L2Q9NZM6 624 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 WRAP73Q9P2S5 460 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 CRLS1Q9UJA2 301 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF391Q9UJN7 358 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 FBXO9Q9UK97 447 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 FRYLO94915 3013 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 PKDREJQ9NTG1 2253 aa-1.06□□□□□ -2.58
RNU6-540P-201ENST00000384622 DNAH8Q96JB1 4490 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 KIAA0100Q14667 2235 aaKnown RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GON4LQ3T8J9 2241 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 BAZ2BQ9UIF8 2168 aaKnown RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 PFASO15067 1338 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 CFAP47Q6ZTR5 3102 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 IGHV3-16A0A0C4DH30 117 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 IGKV1-12A0A0C4DH73 117 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 C17orf113A0A1B0GUU1 675 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 IGKV2-29A2NJV5 120 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 TMEM202A6NGA9 273 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 C17orf100A8MU93 164 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 VILLO15195 856 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 NUPL2O15504 423 aaKnown RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 ADAM12O43184 909 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 TXNL1O43396 289 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 TSC22D2O75157 780 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GPX5O75715 221 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 WISP2O76076 250 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 BMP10O95393 424 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 SEC24AO95486 1093 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 IGKV1D-12P01611 117 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 DEFA4P12838 97 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 EEF2P13639 858 aaKnown RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 ETFAP13804 333 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 HRES1P13985 223 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 CKMT2P17540 419 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GTF2F1P35269 517 aaKnown RBP eCLIP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 EVA1CP58658 441 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 SLC35A2P78381 396 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 NTHL1P78549 312 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 MAP2K1Q02750 393 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 TTF1Q15361 905 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 C12orf74Q32Q52 190 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF506Q5JVG8 444 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 SLC10A5Q5PT55 438 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 CLEC18BQ6UXF7 455 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 KIAA0408Q6ZU52 694 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 EPM2AIP1Q7L775 607 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZER1Q7Z7L7 766 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF554Q86TJ5 538 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 LINC01551Q86U37 167 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 TBC1D26Q86UD7 250 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GPALPP1Q8IXQ4 340 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 PRSS35Q8N3Z0 413 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 DNAAF1Q8NEP3 725 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 BEST2Q8NFU1 509 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 C9orf43Q8TAL5 461 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 FAM71BQ8TC56 605 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 SPPL2AQ8TCT8 520 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GATAD1Q8WUU5 269 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 WDR60Q8WVS4 1066 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 LRTOMTQ8WZ04 291 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 LRRC46Q96FV0 321 aa-1.07□□□□□ -2.58
RNU6-540P-201ENST00000384622 GRAMD2BQ96HH9 432 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms