RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 BMP10O95393 424 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 RPL22P35268 128 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 TNFSF10P50591 281 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 ADARP55265 1226 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 ARF3P61204 181 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 ARHGAP19Q14CB8 494 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 ANKRD20A4Q4UJ75 823 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 CTSL3PQ5NE16 218 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 GARNL3Q5VVW2 1013 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 MRNIPQ6NTE8 343 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 SDCCAG8Q86SQ7 713 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 LAPTM4BQ86VI4 370 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 OR9A1PQ8NGU1 263 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 NR4A3Q92570 626 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 TCF12Q99081 682 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 PLCD4Q9BRC7 762 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 TGIF2Q9GZN2 237 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 RIC8BQ9NVN3 520 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 UTP6Q9NYH9 597 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 TRPC4Q9UBN4 977 aa17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 DRG1Q9Y295 367 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-201ENST00000383820 ABCA12Q86UK0 2595 aa17.02■□□□□ 0.31
RPUSD3-201ENST00000383820 SVILO95425 2214 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 LRBAP50851 2863 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 IGHV1-45A0A0A0MS14 117 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 KRT87PA6NCN2 255 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 ESR1P03372 595 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 NMBRP28336 390 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 HSD17B2P37059 387 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 TDGF1P3P51864 188 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 CRADDP78560 199 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 RELAQ04206 551 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 SNX1Q13596 522 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 FASTKQ14296 549 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 CCNG2Q16589 344 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 TYSND1Q2T9J0 566 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 DRICH1Q6PGQ1 229 aaPredicted RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 OTUD6BQ8N6M0 293 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 BRIX1Q8TDN6 353 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 LPGAT1Q92604 370 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 MARVELD3Q96A59 401 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 DESI2Q9BSY9 194 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 KIFC1Q9BW19 673 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 RNF32Q9H0A6 362 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 RUBCNLQ9H714 662 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 MRPS30Q9NP92 439 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 MKKSQ9NPJ1 570 aaPredicted RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 PTGFRNQ9P2B2 879 aa17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 MRPS2Q9Y399 296 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-201ENST00000383820 LOC102723996A0A087X1L8 192 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 ZNF839A8K0R7 811 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 MYO1CO00159 1063 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 TXNDC9O14530 226 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 PSIP1O75475 530 aaKnown RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 WFS1O76024 890 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 CCNDBP1O95273 360 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 ZSCAN5DPP0CG00 497 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 ICAM2P13598 275 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 PKMP14618 531 aaKnown RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 ARNTP27540 789 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 RPA3P35244 121 aaPredicted RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 SLC26A3P40879 764 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 YBX1P67809 324 aaKnown RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 CDK16Q00536 496 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 ARMC3Q5W041 872 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 SP5Q6BEB4 398 aaPredicted RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 FJX1Q86VR8 437 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 PAQR7Q86WK9 346 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 CSNK1A1LQ8N752 337 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 MAGEB10Q96LZ2 347 aaPredicted RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 TAAR6Q96RI8 345 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 ACAT2Q9BWD1 397 aa17■□□□□ 0.31
RPUSD3-201ENST00000383820 STOX2Q9P2F5 926 aaPredicted RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 RUVBL1Q9Y265 456 aaKnown RBP17■□□□□ 0.31
RPUSD3-201ENST00000383820 ARHGEF33A8MVX0 844 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 NIPSNAP2O75323 286 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 VAPBO95292 243 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 HEXBP07686 556 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 ANXA5P08758 320 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 MYBL2P10244 700 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 EZRP15311 586 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 FMO4P31512 558 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 BASP1P80723 227 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 PRDX1Q06830 199 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 ART3Q13508 389 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 NAA30Q147X3 362 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 ZNF425Q6IV72 752 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 TMEM205Q6UW68 189 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 SRRM1Q8IYB3 904 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 AMER3Q8N944 861 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 DNAJB8Q8NHS0 232 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 MFSD3Q96ES6 412 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 MMABQ96EY8 250 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 OR2A5Q96R48 311 aa16.99■□□□□ 0.31
RPUSD3-201ENST00000383820 YIPF2Q9BWQ6 316 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms