RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RAMP2O60895 175 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CD2P06729 351 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 USP17L7P0C7H9 530 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF7P17097 686 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HDCP19113 662 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PRKACBP22694 351 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CHI3L1P36222 383 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ALDH3B2P48448 385 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 POLR2JP52435 117 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLC6A3Q01959 620 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OGDHQ02218 1023 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GPR50Q13585 617 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SEC23BQ15437 767 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MBLAC2Q68D91 279 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LRRC52Q8N7C0 313 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OR8H1Q8NGG4 311 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 AP1S3Q96PC3 154 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLC4A9Q96Q91 983 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TTLL2Q9BWV7 592 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ACTR8Q9H981 624 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MED17Q9NVC6 651 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CNTN3Q9P232 1028 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CNOT6Q9ULM6 557 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DHRS7Q9Y394 339 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CMAHPQ9Y471 501 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLC7A4O43246 635 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GKN3PP0CG01 181 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DHPSP49366 369 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DGKQP52824 942 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 INHBCP55103 352 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 IL2P60568 153 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TAF13Q15543 124 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 RNF212Q495C1 297 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GAREM2Q75VX8 874 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SV2AQ7L0J3 742 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLC44A3Q8N4M1 653 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ARL11Q969Q4 196 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 RALGAPA2Q2PPJ7 1873 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 C1orf196B1AJZ1 125 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NUDT14O95848 222 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TRUB2O95900 331 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 IFNA10P01566 189 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MSR1P21757 451 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MAOBP27338 520 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CERS1P27544 350 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ATP5C1P36542 298 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PDX1P52945 283 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CDH8P55286 799 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PWP1Q13610 501 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LRRC70Q7Z2Q7 622 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 RANBP9Q96S59 729 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PDZD7Q9H5P4 517 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DTLQ9NZJ0 730 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MARCH2Q9P0N8 246 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TRPC4Q9UBN4 977 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MARCOQ9UEW3 520 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 POLR3HQ9Y535 204 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 AGAP5A6NIR3 686 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 INPPL1O15357 1258 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 P2RX6O15547 441 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LCMT2O60294 686 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLC43A1O75387 559 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CST1P01037 141 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PIPP12273 146 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TFEBP19484 476 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NOMO3P69849 1222 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PTPN11Q06124 597 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MAPKAPK3Q16644 382 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 UAP1L1Q3KQV9 507 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 COMMD2Q86X83 199 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MCEMP1Q8IX19 187 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OFCC1Q8IZS5 231 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CYP4X1Q8N118 509 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 UPF1Q92900 1129 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAIM2Q9BWQ8 316 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GBA3Q9H227 469 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 RNPEPQ9H4A4 650 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NEUROD4Q9HD90 331 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ZDHHC4Q9NPG8 344 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SNX15Q9NRS6 342 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OLAHQ9NV23 265 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CMTM6Q9NX76 183 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SEC14L3Q9UDX4 400 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HSPB2A8KAH6 182 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 H0Y858 1186 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HSMCR30P0CW71 290 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 POU3F3P20264 500 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DLK1P80370 383 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 KCNC4Q03721 635 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CD47Q08722 323 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 IRF4Q15306 451 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HSPB2Q16082 182 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms