RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 RNF175Q8N4F7 328 aa18.93■□□□□ 0.62
CCM2-202ENST00000381112 ABHD11Q8NFV4 315 aa18.93■□□□□ 0.62
CCM2-202ENST00000381112 REPS1Q96D71 796 aa18.93■□□□□ 0.62
CCM2-202ENST00000381112 MTERF1Q99551 399 aaKnown RBP18.93■□□□□ 0.62
CCM2-202ENST00000381112 LRRC61Q9BV99 259 aa18.93■□□□□ 0.62
CCM2-202ENST00000381112 CADM1Q9BY67 442 aaKnown RBP18.93■□□□□ 0.62
CCM2-202ENST00000381112 NOP53Q9NZM5 478 aaKnown RBP18.93■□□□□ 0.62
CCM2-202ENST00000381112 PLXND1Q9Y4D7 1925 aa18.93■□□□□ 0.62
CCM2-202ENST00000381112 GSC2O15499 205 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 PRICKLE3O43900 615 aaPredicted RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 SEC22BO75396 215 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 KRT16P08779 473 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 NME1P15531 152 aaKnown RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 RPL38P63173 70 aaKnown RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 LAPTM5Q13571 262 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 C10orf62Q5T681 223 aaPredicted RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 IL23RQ5VWK5 629 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 ADNP2Q6IQ32 1131 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 TAF8Q7Z7C8 310 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 OR2A1Q8NGT9 310 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 SPNS1Q9H2V7 528 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 SLC40A1Q9NP59 571 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 ASIC5Q9NY37 505 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 SNRPB2P08579 225 aaKnown RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 HSD3B1P14060 373 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 EZRP15311 586 aaKnown RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 HSD3B2P26439 372 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 SHMT2P34897 504 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 NXPH1P58417 271 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 MXRA7P84157 204 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 MAD2L1Q13257 205 aaPredicted RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 C1orf61Q13536 156 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 CUL3Q13618 768 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 HIST2H2ACQ16777 129 aaPredicted RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 PRRT3Q5FWE3 981 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 HIST2H2AA3Q6FI13 130 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 WDR5BQ86VZ2 330 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 HUS1BQ8NHY5 278 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 LCN9Q8WX39 176 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 CMTM7Q96FZ5 175 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 BRF2Q9HAW0 419 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 CUEDC1Q9NWM3 386 aaPredicted RBP18.92■□□□□ 0.62
CCM2-202ENST00000381112 OR6C2Q9NZP2 312 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 ZIM2Q9NZV7 527 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 PCDHB11Q9Y5F2 797 aa18.92■□□□□ 0.62
CCM2-202ENST00000381112 G6PDP11413 515 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 PCNAP12004 261 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 XRCC1P18887 633 aaPredicted RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 MEF2AQ02078 507 aaPredicted RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 PRDX1Q06830 199 aaKnown RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 DDX39BQ13838 428 aaKnown RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 WDR45BQ5MNZ6 344 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 ICE2Q659A1 982 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 ARMCX6Q7L4S7 300 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 LONP2Q86WA8 852 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 AMIGO1Q86WK6 493 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 ZNF740Q8NDX6 193 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 ZFPM2Q8WW38 1151 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 PATE1Q8WXA2 126 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 JPH3Q8WXH2 748 aaPredicted RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 UBE2E3Q969T4 207 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 RCN3Q96D15 328 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 TEX37Q96LM6 180 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 SLC25A23Q9BV35 468 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 TMEM45AQ9NWC5 275 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 EIF3LQ9Y262 564 aaKnown RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 TSC22D4Q9Y3Q8 395 aa18.91■□□□□ 0.62
CCM2-202ENST00000381112 POLR3HQ9Y535 204 aaPredicted RBP18.91■□□□□ 0.62
CCM2-202ENST00000381112 KIR2DS5A0A0G2JLQ3 304 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 A0A0G2JNG1 304 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 OR5K4A6NMS3 321 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 MAGEB17A8MXT2 336 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 KIR2DS3K7RE56 304 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 AIM2O14862 343 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 VILLO15195 856 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 SLC22A3O75751 556 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 CCR8P51685 355 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 UFM1P61960 85 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 UBE2IP63279 158 aaKnown RBP18.9■□□□□ 0.62
CCM2-202ENST00000381112 SLC25A3Q00325 362 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 STX5Q13190 355 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 KIR2DS5Q14953 304 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 DNAL1Q4LDG9 190 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 CYP20A1Q6UW02 462 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 OR4E2Q8NGC2 313 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 APIPQ96GX9 242 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 RAB3IPQ96QF0 476 aaPredicted RBP18.9■□□□□ 0.62
CCM2-202ENST00000381112 ACTL8Q9H568 366 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 POT1Q9NUX5 634 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 SPHK1Q9NYA1 384 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 VPS29Q9UBQ0 182 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 FOXE1O00358 373 aaPredicted RBP18.9■□□□□ 0.62
CCM2-202ENST00000381112 ANKRD28O15084 1053 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 LAMTOR5O43504 91 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 ITGAXP20702 1163 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 PEBP1P30086 187 aaKnown RBP18.9■□□□□ 0.62
CCM2-202ENST00000381112 BLOC1S3Q6QNY0 202 aa18.9■□□□□ 0.62
CCM2-202ENST00000381112 TMIGD1Q6UXZ0 262 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms