RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SEC22BO75396 215 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PDYNP01213 254 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 ADRB3P13945 408 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 ATP6V1B2P21281 511 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 IL12RB1P42701 662 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 OXA1LQ15070 435 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PPP2R2DQ66LE6 453 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 DSG4Q86SJ6 1040 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 IFNEQ86WN2 208 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 KIAA2013Q8IYS2 634 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TMIEQ8NEW7 156 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TMEM74Q96NL1 305 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TMEM245Q9H330 911 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 GDE1Q9NZC3 331 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PCDHA9Q9Y5H5 950 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 SLC28A1O00337 649 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 SLC16A5O15375 505 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 C6P13671 934 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 OPRD1P41143 372 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 GNPDA1P46926 289 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PRLHRP49683 370 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 HNMTP50135 292 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 NKX2-5P52952 324 aaPredicted RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 RHDQ02161 417 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 DNASE1L3Q13609 305 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 EIF4HQ15056 248 aaKnown RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PGS1Q32NB8 556 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 CCSMST1Q4G0I0 132 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TRIM46Q7Z4K8 759 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 CBR4Q8N4T8 237 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 USP7Q93009 1102 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 TMEM125Q96AQ2 219 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 NUS1Q96E22 293 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 ACPTQ9BZG2 426 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 PLA2G2FQ9BZM2 168 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 LRTM1Q9HBL6 345 aa13.84□□□□□ -0.19
CLCN4-201ENST00000380829 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 SPTBN5Q9NRC6 3674 aaKnown RBP13.84□□□□□ -0.19
CLCN4-201ENST00000380829 H0Y858 1186 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PSMD11O00231 422 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 KPNA4O00629 521 aaPredicted RBP13.83□□□□□ -0.19
CLCN4-201ENST00000380829 AREL1O15033 823 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PRAMEF4O60810 478 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 EPHX1P07099 455 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 GSTM1P09488 218 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PDHA2P29803 388 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 HPCAL1P37235 193 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 OPRL1P41146 370 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 BDKRB1P46663 353 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 AP1S2P56377 157 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PRKCQQ04759 706 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PDGFRLQ15198 375 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 PRAMEF9Q5VWM5 478 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 RAET1GQ6H3X3 334 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 NEK10Q6ZWH5 1172 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 GPR149Q86SP6 731 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 NRSN1Q8IZ57 195 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 LIX1Q8N485 282 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 CYGBQ8WWM9 190 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 SELENOMQ8WWX9 145 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 CCM2Q9BSQ5 444 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 OR2AG1Q9H205 316 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 EIF3LQ9Y262 564 aaKnown RBP13.83□□□□□ -0.19
CLCN4-201ENST00000380829 DGKBQ9Y6T7 804 aa13.83□□□□□ -0.19
CLCN4-201ENST00000380829 COL4A3Q01955 1670 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 TCRBV3S1A0A5B6 114 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
CLCN4-201ENST00000380829 NOL3O60936 208 aaKnown RBP13.83□□□□□ -0.2
CLCN4-201ENST00000380829 PAPLNO95428 1278 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 KRT6AP02538 564 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 KRT6BP04259 564 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 CCNA2P20248 432 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 GJA4P35212 333 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 POLR2IP36954 125 aaKnown RBP13.83□□□□□ -0.2
CLCN4-201ENST00000380829 KRT6CP48668 564 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 TPTEP56180 551 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 PFN3P60673 137 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 FOXM1Q08050 763 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 ELP6Q0PNE2 266 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 RUNX3Q13761 415 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 UTS2BQ765I0 119 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 SPPL2CQ8IUH8 684 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 EPHX4Q8IUS5 362 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 CLHC1Q8NHS4 586 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 ADAMTS16Q8TE57 1224 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 SUSD6Q92537 303 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 KXD1Q9BQD3 176 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 ADI1Q9BV57 179 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 PIF1Q9H611 641 aa13.83□□□□□ -0.2
CLCN4-201ENST00000380829 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
CLCN4-201ENST00000380829 NANOGQ9H9S0 305 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms