RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 VWA2Q5GFL6 755 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 CENPUQ71F23 418 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 KCNMB4Q86W47 210 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 CILP2Q8IUL8 1156 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 ST6GALNAC3Q8NDV1 305 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 COG1Q8WTW3 980 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 SMPDL3AQ92484 453 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 C8orf44Q96CB5 159 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 CABS1Q96KC9 395 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 TRIM56Q9BRZ2 755 aaKnown RBP16.07■□□□□ 0.16
SMN2-201ENST00000380741 EPS8L2Q9H6S3 715 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 ZNF160Q9HCG1 818 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 MRPS30Q9NP92 439 aaKnown RBP16.07■□□□□ 0.16
SMN2-201ENST00000380741 C3orf18Q9UK00 162 aa16.07■□□□□ 0.16
SMN2-201ENST00000380741 IGLV3-12A0A075B6K2 115 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 IGKV1-8A0A0C4DH67 115 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 E5RI56 91 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 E2F3O00716 465 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 MAP2K7O14733 419 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 CEP104O60308 925 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 PSIP1O75475 530 aaKnown RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 KLHL18O94889 574 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 HPP00738 406 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 PKMP14618 531 aaKnown RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 CXCR5P32302 372 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 RPA3P35244 121 aaPredicted RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 VPS41P49754 854 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 CDC16Q13042 620 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 TSTA3Q13630 321 aaPredicted RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 KCNJ11Q14654 390 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 ATG9BQ674R7 924 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 B3GNTL1Q67FW5 361 aaPredicted RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 ZNF787Q6DD87 383 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 ISLR2Q6UXK2 745 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 LINC00696Q6ZRV3 163 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 LAPTM4BQ86VI4 370 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 PAQR7Q86WK9 346 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 GRHL3Q8TE85 626 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 PLCD4Q9BRC7 762 aa16.06■□□□□ 0.16
SMN2-201ENST00000380741 RUVBL1Q9Y265 456 aaKnown RBP16.06■□□□□ 0.16
SMN2-201ENST00000380741 FFAR3O14843 346 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 GPR42O15529 346 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 PHF2O75151 1096 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 VPS26AO75436 327 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CATP04040 527 aaKnown RBP16.05■□□□□ 0.16
SMN2-201ENST00000380741 F7P08709 466 aaPredicted RBP16.05■□□□□ 0.16
SMN2-201ENST00000380741 COX6A1P12074 109 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 PAMP19021 973 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CLCN7P51798 805 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 EMP3P54852 163 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 MFAP5Q13361 173 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 DSG2Q14126 1118 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 ARHGAP19Q14CB8 494 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 TLR1Q15399 786 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 HKDC1Q2TB90 917 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 ANKRD22Q5VYY1 191 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 NEPROQ6NW34 567 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CASC4Q6P4E1 433 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 ZNF662Q6ZS27 426 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CAND1Q86VP6 1230 aaKnown RBP16.05■□□□□ 0.16
SMN2-201ENST00000380741 CSNK1A1LQ8N752 337 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 PRELID2Q8N945 189 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 PKP4Q99569 1192 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 SLC30A3Q99726 388 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 FAM114A2Q9NRY5 505 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
SMN2-201ENST00000380741 CPAMD8Q8IZJ3 1885 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
SMN2-201ENST00000380741 IDSB3KWA1 339 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 USP1O94782 785 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 SLC16A8O95907 504 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 CCDC175P0C221 793 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 MAGEA6P43360 314 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 PNLIPRP1P54315 467 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 SARNPP82979 210 aaKnown RBP16.04■□□□□ 0.16
SMN2-201ENST00000380741 PRDX1Q06830 199 aaKnown RBP16.04■□□□□ 0.16
SMN2-201ENST00000380741 GPS1Q13098 491 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 ARMC3Q5W041 872 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 ICE2Q659A1 982 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 ZNF470Q6ECI4 717 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 ZNF425Q6IV72 752 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 NDUFAF7Q7L592 441 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 SPNS2Q8IVW8 549 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 KBTBD2Q8IY47 623 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 AMER3Q8N944 861 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 PPFIBP2Q8ND30 876 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 CATSPER1Q8NEC5 780 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 GIMAP7Q8NHV1 300 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 MVB12AQ96EY5 273 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 OR2A5Q96R48 311 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 LMF1Q96S06 567 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 YIPF2Q9BWQ6 316 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 INTS10Q9NVR2 710 aaKnown RBP16.04■□□□□ 0.16
SMN2-201ENST00000380741 TRPC4Q9UBN4 977 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms