RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 ALPPP05187 535 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 UMODP07911 640 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 ITGAXP20702 1163 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 ARL4CP56559 192 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 FOXL2P58012 376 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 YBX1P67809 324 aaKnown RBP23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 OCA2Q04671 838 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 NKG7Q16617 165 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIF1AQ16665 826 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 NADK2Q4G0N4 442 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 HP1BP3Q5SSJ5 553 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 PRMT9Q6P2P2 845 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 PPP1R32Q7Z5V6 425 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 PAQR7Q86WK9 346 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 SNF8Q96H20 258 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 PDLIM2Q96JY6 352 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 ENAMQ9NRM1 1142 aa23.56■■□□□ 1.36
TNFRSF4-201ENST00000379236 E7ENX8 843 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 H0YGG7 62 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 C8GP07360 202 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 EZRP15311 586 aaKnown RBP23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 ELK3P41970 407 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 ARF3P61204 181 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 TAP2Q03519 686 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 PDAP1Q13442 181 aaKnown RBP23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 RBBP7Q16576 425 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 VWA5B1Q5TIE3 1220 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 CYHR1Q6ZMK1 362 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 SHISA6Q6ZSJ9 500 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 GALNT16Q8N428 558 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 CSNK1A1LQ8N752 337 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 NACC2Q96BF6 587 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 LRRC39Q96DD0 335 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 TRIM51Q9BSJ1 452 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 TRIM31Q9BZY9 425 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 SLC26A1Q9H2B4 701 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 ATP13A2Q9NQ11 1180 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 CCDC177Q9NQR7 707 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 CDC14AQ9UNH5 594 aa23.55■■□□□ 1.36
TNFRSF4-201ENST00000379236 ASH1LQ9NR48 2969 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 AGPSO00116 658 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 NDC80O14777 642 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 TTI1O43156 1089 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 PRPF4O43172 522 aaKnown RBP eCLIP23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 ONECUT2O95948 504 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIST1H2AGP0C0S8 130 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIST1H2ADP20671 130 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 FBLP22087 321 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 MMP11P24347 488 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 IMPA1P29218 277 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 ITGA8P53708 1063 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 SP140Q13342 867 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 IRAK1BP1Q5VVH5 260 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 FBXO42Q6P3S6 717 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 COX15Q7KZN9 410 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 CNTN4Q8IWV2 1026 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 GPATCH11Q8N954 259 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 EEF1AKMT1Q8WVE0 214 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 LINGO1Q96FE5 620 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIST1H2AHQ96KK5 128 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIST1H2AJQ99878 128 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 H2AFJQ9BTM1 129 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 YIPF2Q9BWQ6 316 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 MFRPQ9BY79 579 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 SLAMF7Q9NQ25 335 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 C5AR2Q9P296 337 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 RNF14Q9UBS8 474 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 CTSFQ9UBX1 484 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 ZNF282Q9UDV7 671 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 PYCARDQ9ULZ3 195 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 PLAAQ9Y263 795 aa23.54■■□□□ 1.36
TNFRSF4-201ENST00000379236 TXNDC9O14530 226 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 AHSGP02765 367 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 IVDP26440 423 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 MYBPC3Q14896 1274 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 RBM20Q5T481 1227 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 HIBCHQ6NVY1 386 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 IGDCC3Q8IVU1 814 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 SPNS2Q8IVW8 549 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 MIB2Q96AX9 1013 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 MIEF2Q96C03 454 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 CCDC138Q96M89 665 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 SPSB2Q99619 263 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 SMAD5Q99717 465 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 SEMA3GQ9NS98 782 aa23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 CORO1CQ9ULV4 474 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF4-201ENST00000379236 IGKV1-8A0A0C4DH67 115 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 EFCAB8A8MWE9 144 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 VPS4BO75351 444 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 IPO13O94829 963 aaKnown RBP23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 ANXA5P08758 320 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 ITGA3P26006 1051 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 EMP3P54852 163 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 TBPL1P62380 186 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 AIMP2Q13155 320 aaKnown RBP23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 PRAMEF13Q5VWM6 474 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 ZNF425Q6IV72 752 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 PAQR3Q6TCH7 311 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 GALNT7Q86SF2 657 aa23.52■■□□□ 1.36
TNFRSF4-201ENST00000379236 CPT1CQ8TCG5 803 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms