RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RNF44Q7L0R7 432 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 LINC00523Q86TU6 105 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 MAGED4Q96JG8 741 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 DPH7Q9BTV6 452 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 CARD6Q9BX69 1037 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 ANAPC5Q9UJX4 755 aa16.9■□□□□ 0.3
PDLIM4-202ENST00000379018 TACC2O95359 2948 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 OR5H15A6NDH6 313 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 A8MUI8 341 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 SLCO2B1O94956 709 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 FKBP9O95302 570 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 C1orf105O95561 183 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 CMPK1P30085 196 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 GRIA1P42261 906 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 KRTAP10-9P60411 292 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 MAT1AQ00266 395 aaKnown RBP16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 DSG2Q14126 1118 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 PCOLCEQ15113 449 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 HKDC1Q2TB90 917 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 MFSD4BQ5TF39 518 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 XKRXQ6PP77 449 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNF295-AS1Q8N0V1 137 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 OTUD6BQ8N6M0 293 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 CSNK1A1LQ8N752 337 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 DNAJB8Q8NHS0 232 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 FAM136AQ96C01 138 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 CATSPERZQ9NTU4 200 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 ABCF3Q9NUQ8 709 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 C14orf105Q9NVL8 296 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 STMN3Q9NZ72 180 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 MARCH4Q9P2E8 410 aaPredicted RBP16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 MKL2Q9ULH7 1088 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 CDC14AQ9UNH5 594 aa16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 RUVBL1Q9Y265 456 aaKnown RBP16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 SETD2Q9BYW2 2564 aaPredicted RBP16.89■□□□□ 0.29
PDLIM4-202ENST00000379018 IGLV3-12A0A075B6K2 115 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 A0A0A6YYC8 382 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 IGHV3-20A0A0C4DH32 117 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 A0A0U1RQJ8 604 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 A0A1W2PPV9 198 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 E7EVH7 732 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 I3L1I5 382 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 PRMT5O14744 637 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 STATHP02808 62 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 PSMA3P25788 255 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 SMSP52788 366 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 CDSNQ15517 529 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNF766Q5HY98 468 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 SUSD1Q6UWL2 747 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 RIPOR1Q6ZS17 1223 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 OTOAQ7RTW8 1153 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 OR2A1Q8NGT9 310 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 FOPNLQ96NB1 174 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 MRPS30Q9NP92 439 aaKnown RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 KLHL1Q9NR64 748 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 PACSIN2Q9UNF0 486 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 DUSP10Q9Y6W6 482 aa16.88■□□□□ 0.29
PDLIM4-202ENST00000379018 NCOA6Q14686 2063 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 HEATR5BQ9P2D3 2071 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 OR2A25A4D2G3 310 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNHIT1O43257 154 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 VPS26AO75436 327 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 SEC24DO94855 1032 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 MYBL2P10244 700 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 EIF3BP55884 814 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 LONRF1Q17RB8 773 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 PRTGQ2VWP7 1150 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 AARS2Q5JTZ9 985 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 FBXO42Q6P3S6 717 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 LRRC8BQ6P9F7 803 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 CEP97Q8IW35 865 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 AMER3Q8N944 861 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 MTFMTQ96DP5 389 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 PANX3Q96QZ0 392 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 ZNF700Q9H0M5 742 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 SYNPO2LQ9H987 977 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 ETNK1Q9HBU6 452 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 MKKSQ9NPJ1 570 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 ENAMQ9NRM1 1142 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 ANKRD10Q9NXR5 420 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 TEKT2Q9UIF3 430 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 GNPTGQ9UJJ9 305 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 TCAF1Q9Y4C2 921 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 SCN2AQ99250 2005 aa16.87■□□□□ 0.29
PDLIM4-202ENST00000379018 DIAPH2O60879 1101 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 IFNB1P01574 187 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 ADRA1DP25100 572 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 SSTR2P30874 369 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 RPA3P35244 121 aaPredicted RBP16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 CYLC1P35663 651 aaPredicted RBP16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 BTBD16Q32M84 506 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 ADCK2Q7Z695 626 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 CDH24Q86UP0 819 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 ZC3H7AQ8IWR0 971 aaKnown RBP16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 BEST3Q8N1M1 668 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms