RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ABHD15Q6UXT9 468 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SZRD1Q7Z422 152 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SLC22A9Q8IVM8 553 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 AGBL5Q8NDL9 886 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ZNF555Q8NEP9 628 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TMCO6Q96DC7 493 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 RNF31Q96EP0 1072 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 METTL2AQ96IZ6 378 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NSUN5Q96P11 429 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 WDFY2Q96P53 400 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ACOX2Q99424 681 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 C17orf62Q9BQA9 187 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ITPAQ9BY32 194 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ZCCHC2Q9C0B9 1178 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 C3orf14Q9HBI5 128 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PRDM8Q9NQV8 689 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 DECR2Q9NUI1 292 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 POLR3BQ9NW08 1133 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TLK1Q9UKI8 766 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NDRG4Q9ULP0 352 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 FZD1Q9UP38 647 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 KLF2Q9Y5W3 355 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PEX16Q9Y5Y5 336 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NYNRINQ9P2P1 1898 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 IGKV6D-21A0A0A0MT36 114 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 CLRN2A0PK11 232 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 AP3B1O00203 1094 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 CACNB4O00305 520 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ARNTLO00327 626 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 DCLK1O15075 740 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 OGTO15294 1046 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ARHGEF15O94989 841 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 FTH1P02794 183 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 F7P08709 466 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NCK1P16333 377 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 GTF2E2P29084 291 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SDC4P31431 198 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 MAP2K4P45985 399 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 KCNC1P48547 511 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SCNN1GP51170 649 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 KPNA2P52292 529 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TFAMQ00059 246 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 POU4F1Q01851 419 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 HYAL2Q12891 473 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 RIN1Q13671 783 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 IRF3Q14653 427 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 EMC2Q15006 297 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 FLYWCH1Q4VC44 716 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PAGE3Q5JUK9 113 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ARHGEF16Q5VV41 709 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SLC46A3Q7Z3Q1 461 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TMEM179BQ7Z7N9 219 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TSPYL5Q86VY4 417 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 CCDC103Q8IW40 242 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 DTWD1Q8N5C7 304 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TP53I13Q8NBR0 393 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 CHURC1Q8WUH1 139 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 GTF2H4Q92759 462 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NT5C3BQ969T7 300 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NCLNQ969V3 563 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NSMCE2Q96MF7 247 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 GAD1Q99259 594 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 GPR63Q9BZJ6 419 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 IARS2Q9NSE4 1012 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PLCXD1Q9NUJ7 323 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 AIG1Q9NVV5 245 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 EHD3Q9NZN3 535 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SNX7Q9UNH6 387 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PIAS3Q9Y6X2 628 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 V9GYH0 126 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 MYO18AQ92614 2054 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 MEIOCA2RUB1 952 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 SNTNA6NMZ2 147 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NR5A2O00482 541 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 VPS4BO75351 444 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ASNSP08243 561 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 CSF1P09603 554 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NR2F1P10589 423 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PTPN3P26045 913 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 NMBRP28336 390 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 LIPAP38571 399 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PPP3CCP48454 512 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 OR4D2P58180 307 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 DEFA1P59665 94 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 DEFA3P59666 94 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 PRKCEQ02156 737 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 MGAT3Q09327 533 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 RIPPLY1Q0D2K3 151 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 ASAH1Q13510 395 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TARBP2Q15633 366 aaKnown RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 TBCEQ15813 527 aaPredicted RBP6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 UGP2Q16851 508 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 BCL7AQ4VC05 210 aa6.5□□□□□ -1.37
CDKAL1-202ENST00000378610 UNC50Q53HI1 259 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms