RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ASRGL1Q7L266 308 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF551Q7Z340 670 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PGAM4Q8N0Y7 254 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MIEF2Q96C03 454 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TRAPPC9Q96Q05 1148 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TCF12Q99081 682 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CHID1Q9BWS9 393 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PDFQ9HBH1 243 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MBNL1Q9NR56 388 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 IL20RAQ9UHF4 553 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ANAPC2Q9UJX6 822 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 N6AMT1Q9Y5N5 214 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 POM121BA6NF01 834 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 KPNA4O00629 521 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NDUFS4O43181 175 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ERI3O43414 337 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CXCL10P02778 98 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ZDHHC11BP0C7U3 371 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 GNAZP19086 355 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ACSL1P33121 698 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MASP1P48740 699 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NUDT6P53370 316 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 LRRC32Q14392 662 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ELAVL3Q14576 367 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 KRT72Q14CN4 511 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CPTPQ5TA50 214 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 BRAT1Q6PJG6 821 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 HTR3DQ70Z44 454 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MTSS1LQ765P7 747 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TICAM1Q8IUC6 712 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 Q8N9G6 341 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PKP4Q99569 1192 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CD244Q9BZW8 370 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 EPS8L2Q9H6S3 715 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ADAP2Q9NPF8 381 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CUEDC1Q9NWM3 386 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 C1orf109Q9NX04 203 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF510Q9Y2H8 683 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 OAS3Q9Y6K5 1087 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TMEM247A6NEH6 219 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NME4O00746 187 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ARPC2O15144 300 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PCDH7O60245 1069 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NPHS1O60500 1241 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 IFNA16P05015 189 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NUDT7P0C024 238 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 BCKDHAP12694 445 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TNNI3P19429 210 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 AOC1P19801 751 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MTHFRP42898 656 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CST6Q15828 149 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ITPRIPL2Q3MIP1 535 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 GPAT3Q53EU6 434 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 C9orf64Q5T6V5 341 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NANOGP8Q6NSW7 305 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CIDECQ96AQ7 238 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PPP3R2Q96LZ3 170 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 NANOGQ9H9S0 305 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PHPT1Q9NRX4 125 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 VAPAQ9P0L0 249 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 SPTBN5Q9NRC6 3674 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 MANBAO00462 879 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 KLF11O14901 512 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PAX3P23760 479 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 MAPK12P53778 367 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 MRPS35P82673 323 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 CREMQ03060 361 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 TJAP1Q5JTD0 557 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 FAM46CQ5VWP2 391 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 NEK5Q6P3R8 708 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SATL1Q86VE3 508 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SLC15A3Q8IY34 581 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SNRNP27Q8WVK2 155 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PPCDCQ96CD2 204 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 BRINP2Q9C0B6 783 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SLC32A1Q9H598 525 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 NUDT4Q9NZJ9 180 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 STK39Q9UEW8 545 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 UTS2RQ9UKP6 389 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SLC9A8Q9Y2E8 581 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 LRCH1Q9Y2L9 728 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 SAMHD1Q9Y3Z3 626 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PCDHGB5Q9Y5G0 923 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 C15orf38-AP3S2A0A0A6YYH1 394 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 FRS3O43559 492 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 FKBP6O75344 327 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 IL6P05231 212 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 LAMP1P11279 417 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 IL1RNP18510 177 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 POLR2IP36954 125 aaKnown RBP7.85□□□□□ -1.15
CKAP2-203ENST00000378037 PGDP52209 483 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 ESRRGP62508 458 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 HOXC5Q00444 222 aa7.85□□□□□ -1.15
CKAP2-203ENST00000378037 CYP2A13Q16696 494 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms