RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PIGXQ8TBF5 258 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FARSBQ9NSD9 589 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 IGLV3-10A0A075B6K4 115 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZSCAN9O15535 394 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 BAMBIQ13145 260 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CYP20A1Q6UW02 462 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ANGPTL6Q8NI99 470 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM138Q9NPI0 162 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DUSP12Q9UNI6 340 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ERVK-11Q9UQG0 969 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FAM198BQ6UWH4 519 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 HTR1BP28222 390 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RASGEF1BQ0VAM2 473 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 METTL11BQ5VVY1 283 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 Q6ZNX1 250 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DCUN1D3Q8IWE4 304 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CANT1Q8WVQ1 401 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RPL3LQ92901 407 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RIOK2Q9BVS4 552 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 NCKAP1Q9Y2A7 1128 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PGM3O95394 542 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MAP2K4P45985 399 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 AKR1D1P51857 326 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 NOGQ13253 232 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DCDC5Q6ZRR9 648 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TBCDQ9BTW9 1192 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 HDHD5Q9BXW7 423 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PRAMEF12O95522 483 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 THOP1P52888 689 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC27A4Q6P1M0 643 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 BBS4Q96RK4 519 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF107Q9UII5 783 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF490Q9ULM2 529 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PLOD2O00469 737 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC35E2BP0CK96 405 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PRPH2P23942 346 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PRPS1P60891 318 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 NKX3-2P78367 333 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 EEF1AKMT1Q8WVE0 214 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MAN2C1Q9NTJ4 1040 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SMPD4Q9NXE4 827 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 IKZF3Q9UKT9 509 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FIS1Q9Y3D6 152 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PCDHGA12O60330 932 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 AMHP03971 560 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RPS14P62263 151 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CERCAMQ5T4B2 595 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 KCTD11Q693B1 232 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC6A19Q695T7 634 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ARNTL2Q8WYA1 636 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ACOX2Q99424 681 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM36Q9NQ86 728 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GPR45Q9Y5Y3 372 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CBX4O00257 560 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 HENMT1Q5T8I9 393 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GRIN3AQ8TCU5 1115 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM8Q9BZR9 551 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PCDHAC2Q9Y5I4 1007 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SOX11P35716 441 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 OR8D1Q8WZ84 308 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZBTB12Q9Y330 459 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CDH10Q9Y6N8 788 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ACTBP60709 375 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ACTG1P63261 375 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GPR142Q7Z601 462 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC12A8A0AV02 714 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ARHGEF33A8MVX0 844 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MAFKO60675 156 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 NFATC3Q12968 1075 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CPZQ66K79 652 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PNPOQ9NVS9 261 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SPG21Q9NZD8 308 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 A0A1W2PRQ8 180 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 KLK8O60259 260 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MT-ND5P03915 603 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DGCR6Q14129 220 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 KAT2AQ92830 837 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 LYSMD1Q96S90 227 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 EXO5Q9H790 373 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SIRT5Q9NXA8 310 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GGT7Q9UJ14 662 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RNF6Q9Y252 685 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 B4GALT5O43286 388 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SAGP10523 405 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MALT1Q9UDY8 824 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 IDSP22304 550 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TAGLNQ01995 201 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SF3A3Q12874 501 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 C1orf220Q5T0J3 134 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CIPCQ9C0C6 399 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CWH43Q9H720 699 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TGOLN2O43493 480 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PHC2Q8IXK0 858 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DHRS1Q96LJ7 313 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 IL37Q9NZH6 218 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms