RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RAP2AP10114 183 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 YAP1P46937 504 aaKnown RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 SLC6A11P48066 632 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 ARL10Q8N8L6 244 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PRAP1Q96NZ9 151 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 XKR8Q9H6D3 395 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 AIG1Q9NVV5 245 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 RAB26Q9ULW5 256 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TRIP12Q14669 1992 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 FAM92AA1XBS5 289 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 BCAS2O75934 225 aaPredicted RBP14.08□□□□□ -0.15
TCOF1-202ENST00000377797 NCF4Q15080 339 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 FAM78AQ5JUQ0 283 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 LIPJQ5W064 366 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 PPP4R4Q6NUP7 873 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 CEP68Q76N32 757 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 OR52J3Q8NH60 311 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 TSPEARQ8WU66 669 aa14.08□□□□□ -0.15
TCOF1-202ENST00000377797 A0A0J9YVX5 310 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 MAN1A2O60476 641 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 PDYNP01213 254 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 LYNP07948 512 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 T-ENOLP0DO92 83 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 C5AR1P21730 350 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 DOC2AQ14183 400 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 NOXRED1Q6NXP6 359 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 LIPIQ6XZB0 460 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 PARS2Q7L3T8 475 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 TRIM8Q9BZR9 551 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 LMAN2LQ9H0V9 348 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 ACTR3BQ9P1U1 418 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 RHPN2P1A8MT19 583 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 PPP6CO00743 305 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 RNGTTO60942 597 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 IGLV3-27P01718 113 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 CCNYL3P0C7X3 344 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 THRBP10828 461 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 CPN2P22792 545 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 TAS2R50P59544 299 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 BROXQ5VW32 411 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 TYW3Q6IPR3 259 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 GPR65Q8IYL9 337 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 OR2A12Q8NGT7 310 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 HMX2A2RU54 273 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 IFNW1P05000 195 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 TIMP2P16035 220 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 PRR5P85299 388 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 NFE2L1Q14494 772 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 CD300LGQ6UXG3 332 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 RBM4BQ9BQ04 359 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 RBM4Q9BWF3 364 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 SLC12A9Q9BXP2 914 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 RC3H2Q9HBD1 1191 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 PAPOLBQ9NRJ5 636 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 CDV3Q9UKY7 258 aaKnown RBP14.08□□□□□ -0.16
TCOF1-202ENST00000377797 OR1A2Q9Y585 309 aa14.08□□□□□ -0.16
TCOF1-202ENST00000377797 EIF3FO00303 357 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 RGS5O15539 181 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 BCKDHAP12694 445 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PAICSP22234 425 aaKnown RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 IGFBP5P24593 272 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TOP3AQ13472 1001 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 NDUFA9Q16795 377 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TCEAL5Q5H9L2 206 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 GALNT7Q86SF2 657 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 OR5AK3PQ8NH89 298 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 IL37Q9NZH6 218 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 CNTRLQ7Z7A1 2325 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PRSS51A0A1B0GVH4 220 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 B4DGG1 531 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 SLC16A8O95907 504 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PENKP01210 267 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TNFP01375 233 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ALAS2P22557 587 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 UGT2B15P54855 530 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TBPL1P62380 186 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ZNF540Q8NDQ6 660 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 UBXN10Q96LJ8 280 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ATOH8Q96SQ7 321 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 KLHL25Q9H0H3 589 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 NDUFS4O43181 175 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PRKD3O94806 890 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 C1GALT1C1LP0DN25 315 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 FOXA1P55317 472 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 NANOGP8Q6NSW7 305 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PRR23BQ6ZRT6 265 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ASRGL1Q7L266 308 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 NANOGQ9H9S0 305 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ZNF229Q9UJW7 825 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 DLGAP4Q9Y2H0 992 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 PCDHB11Q9Y5F2 797 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TNFRSF11BO00300 401 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 OCM2P0CE71 109 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 OCMP0CE72 109 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 ST13P50502 369 aaKnown RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 RAB8AP61006 207 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms