RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 GALNT7Q86SF2 657 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 CREG2Q8IUH2 290 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 CNTN4Q8IWV2 1026 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 GALNT16Q8N428 558 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 METTL27Q8N6F8 245 aaPredicted RBP16.39■□□□□ 0.21
USP11-202ENST00000377078 CSNK1A1LQ8N752 337 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 TM9SF4Q92544 642 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 CFAP36Q96G28 342 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 SNF8Q96H20 258 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 CCDC138Q96M89 665 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 NDNQ99608 321 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 NUDT9Q9BW91 350 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 PCBD2Q9H0N5 130 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 ZNF304Q9HCX3 659 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 ATP13A2Q9NQ11 1180 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 CCDC177Q9NQR7 707 aaPredicted RBP16.39■□□□□ 0.21
USP11-202ENST00000377078 SEMA3GQ9NS98 782 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 SLC22A11Q9NSA0 550 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 ABCF3Q9NUQ8 709 aa16.39■□□□□ 0.21
USP11-202ENST00000377078 FER1L5A0AVI2 2057 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 LOC105369274A0A096LPK9 316 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 LOC102723532A0A0G2JNH3 316 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 H0YGG7 62 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 CNOT3O75175 753 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 BANF1O75531 89 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 UMODP07911 640 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 HIST1H2AGP0C0S8 130 aaPredicted RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 HIST1H2ADP20671 130 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 FBLP22087 321 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 HRH2P25021 359 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 VARSP26640 1264 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 OR1D4P47884 311 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MLLT10P55197 1068 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 ARF3P61204 181 aaPredicted RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 RELAQ04206 551 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 AIMP2Q13155 320 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 RAPSNQ13702 412 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MYBPC3Q14896 1274 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 IGFBP7Q16270 282 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MSS51Q4VC12 460 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 GARNL3Q5VVW2 1013 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 CYHR1Q6ZMK1 362 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 PAQR7Q86WK9 346 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 OR4N4Q8N0Y3 316 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 PPFIBP2Q8ND30 876 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MVB12AQ96EY5 273 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 HIST1H2AHQ96KK5 128 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 SMAD5Q99717 465 aaKnown RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 HIST1H2AJQ99878 128 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 H2AFJQ9BTM1 129 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 SLAMF7Q9NQ25 335 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 ZNF282Q9UDV7 671 aaPredicted RBP16.38■□□□□ 0.21
USP11-202ENST00000377078 CHMP2BQ9UQN3 213 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MAU2Q9Y6X3 613 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 NBASA2RRP1 2371 aa16.38■□□□□ 0.21
USP11-202ENST00000377078 MED13Q9UHV7 2174 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 SETXQ7Z333 2677 aaKnown RBP16.37■□□□□ 0.21
USP11-202ENST00000377078 SPENQ96T58 3664 aaKnown RBP16.37■□□□□ 0.21
USP11-202ENST00000377078 SLC16A5O15375 505 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 VPS4BO75351 444 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 ANXA5P08758 320 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 IVDP26440 423 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 ELK3P41970 407 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 RBBP7Q16576 425 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 NADK2Q4G0N4 442 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 ZNF425Q6IV72 752 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 FBXO42Q6P3S6 717 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 COX15Q7KZN9 410 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 CPT1CQ8TCG5 803 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 EEF1AKMT1Q8WVE0 214 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.37■□□□□ 0.21
USP11-202ENST00000377078 MIB2Q96AX9 1013 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 SPSB2Q99619 263 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 CRB3Q9BUF7 120 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 SOX17Q9H6I2 414 aaPredicted RBP16.37■□□□□ 0.21
USP11-202ENST00000377078 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 CTSFQ9UBX1 484 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 VPS4AQ9UN37 437 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 PLAAQ9Y263 795 aa16.37■□□□□ 0.21
USP11-202ENST00000377078 TTI1O43156 1089 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 NRP2O60462 931 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 SEC31AO94979 1220 aaKnown RBP16.36■□□□□ 0.21
USP11-202ENST00000377078 AHSGP02765 367 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 CCND1P24385 295 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 IMPA1P29218 277 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 ITGA8P53708 1063 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 IL2P60568 153 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 TBPL1P62380 186 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 YBX1P67809 324 aaKnown RBP16.36■□□□□ 0.21
USP11-202ENST00000377078 NDUFA9Q16795 377 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 PRTGQ2VWP7 1150 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 PRAMEF13Q5VWM6 474 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
USP11-202ENST00000377078 PAQR3Q6TCH7 311 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 BBOF1Q8ND07 529 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 MIEF2Q96C03 454 aa16.36■□□□□ 0.21
USP11-202ENST00000377078 LINGO1Q96FE5 620 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms