RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 C11orf24Q96F05 449 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 TBX5Q99593 518 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 ENGP17813 658 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 SDC2P34741 201 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 IL18R1Q13478 541 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 PTPRCAPQ14761 206 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 RBM20Q5T481 1227 aaKnown RBP13.27□□□□□ -0.28
GPC6-201ENST00000377047 DCUN1D3Q8IWE4 304 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 TMEM125Q96AQ2 219 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 BCHEP06276 602 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 KCNJ11Q14654 390 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 DCAF12L1Q5VU92 463 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.28
GPC6-201ENST00000377047 KCNH6Q9H252 994 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 SQORQ9Y6N5 450 aa13.27□□□□□ -0.28
GPC6-201ENST00000377047 AHSGP02765 367 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 RPS13P62277 151 aaKnown RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 GAL3ST1Q99999 423 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 Q9N2J8 555 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 SLC6A9P48067 706 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 DECR1Q16698 335 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 HRASLS2Q9NWW9 162 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 C2orf78A6NCI8 922 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 ANXA2P2A6NMY6 339 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 GBAP04062 536 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 ANXA2P07355 339 aaKnown RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 CDH1P12830 882 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 CYP27C1Q4G0S4 372 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.29
GPC6-201ENST00000377047 AGTRAPQ6RW13 159 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 OR4F6Q8NGB9 312 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 AKTIPQ9H8T0 292 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 FLRT1Q9NZU1 646 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 DKKL1Q9UK85 242 aa13.27□□□□□ -0.29
GPC6-201ENST00000377047 ETV3P41162 512 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 PLEKHG6Q3KR16 790 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 CLEC12AQ5QGZ9 265 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SLC9A4Q6AI14 798 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 Q6ZVL8 140 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 USP30Q70CQ3 517 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
GPC6-201ENST00000377047 TRIM63Q969Q1 353 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ADAMTS10Q9H324 1103 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 IL21RQ9HBE5 538 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 NLE1Q9NVX2 485 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 AK5Q9Y6K8 562 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SPEF2Q9C093 1822 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 RFPL2O75678 378 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 PGLSO95336 258 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 CCT3P49368 545 aaKnown RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 DUSP3P51452 185 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 RASGEF1BQ0VAM2 473 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ZNF648Q5T619 568 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 TMIGD1Q6UXZ0 262 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 LAPTM4BQ86VI4 370 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 CLIP4Q8N3C7 705 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 MEIOBQ8N635 442 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SMURF2Q9HAU4 748 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 TMLHEQ9NVH6 421 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 MAN2B2Q9Y2E5 1009 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 SERPINA3P01011 423 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 STARP49675 285 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 RPL26P61254 145 aaKnown RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 ALG1LQ6GMV1 187 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 UBE2J2Q8N2K1 259 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 FITM2Q8N6M3 262 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 NATD1Q8N6N6 113 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 OR51B5Q9H339 312 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 FETUBQ9UGM5 382 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 GPR34Q9UPC5 381 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 EME2A4GXA9 379 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 CLIC1O00299 241 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ZNF865P0CJ78 1059 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 PTCHD3Q3KNS1 767 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 UTS2BQ765I0 119 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 PROKR2Q8NFJ6 384 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ZNF641Q96N77 438 aaPredicted RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 CAMK1GQ96NX5 476 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■□□ 15.4
GPC6-201ENST00000377047 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
GPC6-201ENST00000377047 MANBAO00462 879 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ITM2AO43736 263 aa13.26□□□□□ -0.29
GPC6-201ENST00000377047 ZNF20P17024 532 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms