RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CTSOP43234 321 aaPredicted RBP24.55■■□□□ 1.52
C9orf40-201ENST00000376854 SNRPD1P62314 119 aaKnown RBP24.55■■□□□ 1.52
C9orf40-201ENST00000376854 NPTX1Q15818 432 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 VMACQ2NL98 169 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 SYT12Q8IV01 421 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 RBM12BQ8IXT5 1001 aaKnown RBP24.55■■□□□ 1.52
C9orf40-201ENST00000376854 ZZZ3Q8IYH5 903 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 ITFG2Q969R8 447 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 DOLKQ9UPQ8 538 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 GMPPBQ9Y5P6 360 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 GABARAPO95166 117 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 DNAJA1P31689 397 aaKnown RBP24.54■■□□□ 1.52
C9orf40-201ENST00000376854 MAP2K4P45985 399 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 CCR3P51677 355 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 ZNF621Q6ZSS3 439 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 BBS7Q8IWZ6 715 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 RPS6KA6Q9UK32 745 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 PCDHGA10Q9Y5H3 936 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 INSL5Q9Y5Q6 135 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 HSPE1-MOB4S4R3N1 261 aa24.54■■□□□ 1.52
C9orf40-201ENST00000376854 CLDN25C9JDP6 229 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 EPN2O95208 641 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 KCNK5O95279 499 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 JUNDP17535 347 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 FPR1P21462 350 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 CHIT1Q13231 466 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 ZNF846Q147U1 533 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 VTCN1Q7Z7D3 282 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 HORMAD1Q86X24 394 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 ATG10Q9H0Y0 220 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 DUSP21Q9H596 190 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 SUV39H2Q9H5I1 410 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 IL21Q9HBE4 155 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 SCN3BQ9NY72 215 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 PDP1Q9P0J1 537 aaPredicted RBP24.53■■□□□ 1.52
C9orf40-201ENST00000376854 ERVW-1Q9UQF0 538 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 ZSCAN9O15535 394 aaPredicted RBP24.53■■□□□ 1.52
C9orf40-201ENST00000376854 MPC1LP0DKB6 136 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 SRCP12931 536 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 CYP2A7P20853 494 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 CD6P30203 668 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 KDELR2P33947 212 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 BCAP31P51572 246 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 SLC35A2P78381 396 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 VLDLRP98155 873 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 UGT8Q16880 541 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 DEFB115Q30KQ5 88 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 MPPE1Q53F39 396 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 EGFLAMQ63HQ2 1017 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 LAIR1Q6GTX8 287 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 SLCO6A1Q86UG4 719 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 PGBD3Q8N328 593 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 FIBINQ8TAL6 211 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 ECHDC3Q96DC8 303 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 APOL4Q9BPW4 351 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 CFAP97Q9P2B7 532 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 PCDH10Q9P2E7 1040 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 LAMA3Q16787 3333 aa24.53■■□□□ 1.52
C9orf40-201ENST00000376854 COL4A6Q14031 1691 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 MAGEB17A8MXT2 336 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 UPK3BL1B0FP48 263 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 UPK3BL2E5RIL1 263 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SEMG1P04279 462 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SRSF11Q05519 484 aaKnown RBP24.52■■□□□ 1.52
C9orf40-201ENST00000376854 TTC29Q8NA56 475 aaPredicted RBP24.52■■□□□ 1.52
C9orf40-201ENST00000376854 BCL7BQ9BQE9 202 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 TMPRSS11EQ9UL52 423 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 MICAL3Q7RTP6 2002 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SERTM1A2A2V5 107 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 FKBP9O95302 570 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 CKMP06732 381 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 JUPP14923 745 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 GPX2P18283 190 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 CXCR4P61073 352 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 CYP4F8P98187 520 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 RELAQ04206 551 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 ABRQ12979 859 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SP140Q13342 867 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 LRRC73Q5JTD7 316 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 ERICH5Q6P6B1 374 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 MCCC1Q96RQ3 725 aaPredicted RBP24.52■■□□□ 1.52
C9orf40-201ENST00000376854 DPH2Q9BQC3 489 aaPredicted RBP24.52■■□□□ 1.52
C9orf40-201ENST00000376854 HMG20AQ9NP66 347 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SELENONQ9NZV5 590 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 CD84Q9UIB8 345 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 PPIL1Q9Y3C6 166 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 SH3BP1Q9Y3L3 701 aa24.52■■□□□ 1.52
C9orf40-201ENST00000376854 GFYI3L273 518 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 SLC22A1O15245 554 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 CPSF4O95639 269 aaKnown RBP24.51■■□□□ 1.51
C9orf40-201ENST00000376854 UGT2B4P06133 528 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 COX7A2P14406 83 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 PORP16435 677 aaPredicted RBP24.51■■□□□ 1.51
C9orf40-201ENST00000376854 WNT3P56703 355 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 KCNC4Q03721 635 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 RAB33AQ14088 237 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 MPP7Q5T2T1 576 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 NIPAL1Q6NVV3 410 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 CCDC81Q6ZN84 652 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 BTLAQ7Z6A9 289 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms