RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SERPINB12Q96P63 405 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 WDR77Q9BQA1 342 aaPredicted RBP20.08■□□□□ 0.81
VSX1-201ENST00000376707 CCDC68Q9H2F9 335 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 STOX2Q9P2F5 926 aaPredicted RBP20.08■□□□□ 0.81
VSX1-201ENST00000376707 ZNF282Q9UDV7 671 aaPredicted RBP20.08■□□□□ 0.81
VSX1-201ENST00000376707 CCDC88CQ9P219 2028 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 FBLP22087 321 aaKnown RBP20.07■□□□□ 0.8
VSX1-201ENST00000376707 FNTAP49354 379 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 KLC1Q07866 573 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 HIF1AQ16665 826 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 FBXO42Q6P3S6 717 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 CUZD1Q86UP6 607 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 NAT8LQ8N9F0 302 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 OR11G2Q8NGC1 345 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 PPP4R1Q8TF05 950 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 PKP4Q99569 1192 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 PLCD4Q9BRC7 762 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 LHPPQ9H008 270 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 UTP6Q9NYH9 597 aaKnown RBP20.07■□□□□ 0.8
VSX1-201ENST00000376707 SNX12Q9UMY4 172 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 CDC14AQ9UNH5 594 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 PCDHGA10Q9Y5H3 936 aa20.07■□□□□ 0.8
VSX1-201ENST00000376707 ZCWPW2A0A1B0GU75 182 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 H0YGG7 62 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 CCNDBP1O95273 360 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 CBX6O95503 412 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 ZGLP1P0C6A0 271 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 CLCN7P51798 805 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 PNLIPRP1P54315 467 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 ARF3P61204 181 aaPredicted RBP20.06■□□□□ 0.8
VSX1-201ENST00000376707 ELOAQ14241 798 aaKnown RBP20.06■□□□□ 0.8
VSX1-201ENST00000376707 PRTGQ2VWP7 1150 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 NEK10Q6ZWH5 1172 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 GRK7Q8WTQ7 553 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 THOC3Q96J01 351 aaKnown RBP20.06■□□□□ 0.8
VSX1-201ENST00000376707 C10orf90Q96M02 699 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 KCNF1Q9H3M0 494 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 EPS8L2Q9H6S3 715 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 FBXO6Q9NRD1 293 aaPredicted RBP20.06■□□□□ 0.8
VSX1-201ENST00000376707 TAC3Q9UHF0 121 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 C3orf18Q9UK00 162 aa20.06■□□□□ 0.8
VSX1-201ENST00000376707 GOLGA6L10A0A0M3HER8 536 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 MAP2K7O14733 419 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 PRPF4O43172 522 aaKnown RBP eCLIP20.05■□□□□ 0.8
VSX1-201ENST00000376707 KIF5CO60282 957 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 DDAH2O95865 285 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 SYF2O95926 243 aaKnown RBP20.05■□□□□ 0.8
VSX1-201ENST00000376707 F7P08709 466 aaPredicted RBP20.05■□□□□ 0.8
VSX1-201ENST00000376707 RNF224P0DH78 156 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 ACPPP15309 386 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 EMP3P54852 163 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 PRDX1Q06830 199 aaKnown RBP20.05■□□□□ 0.8
VSX1-201ENST00000376707 CTBP1Q13363 440 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 CUL1Q13616 776 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 CRB2Q5IJ48 1285 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 ICE2Q659A1 982 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 HIST2H2BCQ6DN03 193 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 PAQR7Q86WK9 346 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 DENND6AQ8IWF6 608 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 AGGF1Q8N302 714 aaeCLIP20.05■□□□□ 0.8
VSX1-201ENST00000376707 CSNK1A1LQ8N752 337 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 PPFIBP2Q8ND30 876 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 DNAJB14Q8TBM8 379 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 SLC30A3Q99726 388 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 YIPF2Q9BWQ6 316 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 AGPAT4Q9NRZ5 378 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 ABCF3Q9NUQ8 709 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 KLHL42Q9P2K6 505 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 NOVA2Q9UNW9 492 aaKnown RBP20.05■□□□□ 0.8
VSX1-201ENST00000376707 CSAG2Q9Y5P2 127 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 MAD1L1Q9Y6D9 718 aa20.05■□□□□ 0.8
VSX1-201ENST00000376707 SPTAN1Q13813 2472 aaKnown RBP20.04■□□□□ 0.8
VSX1-201ENST00000376707 IGKV1-8A0A0C4DH67 115 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 ANKUB1A6NFN9 424 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 SLC16A8O95907 504 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 HPP00738 406 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 ESPL1Q14674 2120 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 VWA2Q5GFL6 755 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 IGFL2Q6UWQ7 119 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 ADCK2Q7Z695 626 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 LMNTD2Q8IXW0 634 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 PPIL6Q8IXY8 311 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 GIMAP7Q8NHV1 300 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 ZNF480Q8WV37 535 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 KCNJ9Q92806 393 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 RERGQ96A58 199 aaPredicted RBP20.04■□□□□ 0.8
VSX1-201ENST00000376707 MVB12AQ96EY5 273 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 CNDP1Q96KN2 507 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 SIGLEC10Q96LC7 697 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 ZNF160Q9HCG1 818 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 C20orf96Q9NUD7 363 aaPredicted RBP20.04■□□□□ 0.8
VSX1-201ENST00000376707 TRPC4Q9UBN4 977 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 RUVBL1Q9Y265 456 aaKnown RBP20.04■□□□□ 0.8
VSX1-201ENST00000376707 NTNG1Q9Y2I2 539 aa20.04■□□□□ 0.8
VSX1-201ENST00000376707 PCM1Q15154 2024 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ANKRD12Q6UB98 2062 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 IGLV3-12A0A075B6K2 115 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 A1L4Q6 167 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 SMAPO00193 183 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms