RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BTLAQ7Z6A9 289 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 VTCN1Q7Z7D3 282 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 VRK3Q8IV63 474 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 CSGALNACT1Q8TDX6 532 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 GLMNQ92990 594 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 P2RY13Q9BPV8 354 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 BCL7BQ9BQE9 202 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 ATG10Q9H0Y0 220 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 DNAJC11Q9NVH1 559 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 KIAA1522Q9P206 1035 aaPredicted RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 MBD1Q9UIS9 605 aaPredicted RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 ERVW-1Q9UQF0 538 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 EPN2O95208 641 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 PARNO95453 639 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 CPSF4O95639 269 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 CDH3P22223 829 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 ACVR2AP27037 513 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 CD70P32970 193 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 HNRNPFP52597 415 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 VLDLRP98155 873 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 KCNC4Q03721 635 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 MTAPQ13126 283 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 CHIT1Q13231 466 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 ADPRMQ3LIE5 342 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 LHX8Q68G74 356 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 LAIR1Q6GTX8 287 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 USP45Q70EL2 814 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 ZZZ3Q8IYH5 903 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 PGBD3Q8N328 593 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 VMP1Q96GC9 406 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 WDR12Q9GZL7 423 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 ZNF334Q9HCZ1 680 aaPredicted RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 NECTIN3Q9NQS3 549 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 SAMHD1Q9Y3Z3 626 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 KRT87PA6NCN2 255 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 MAGEB17A8MXT2 336 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 NPIPB8E9PQR5 432 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 NUAK1O60285 661 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 GPX2P18283 190 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 EPHB3P54753 998 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 SNRPD1P62314 119 aaKnown RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 SP3Q02447 781 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 UGT8Q16880 541 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ERICH5Q6P6B1 374 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 TSPYL5Q86VY4 417 aaPredicted RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 RNF168Q8IYW5 571 aaPredicted RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 NDNFQ8TB73 568 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 S100ZQ8WXG8 99 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 YIPF6Q96EC8 236 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ASPSCR1Q9BZE9 553 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 SUV39H2Q9H5I1 410 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 DAPK2Q9UIK4 370 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ZNF232Q9UNY5 417 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 JRKO75564 520 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 NADKO95544 446 aaPredicted RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 COX7A2P14406 83 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 CYP2A7P20853 494 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 PSMB9P28065 219 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 VBP1P61758 197 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ABRQ12979 859 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 DGCR6Q14129 220 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 CLCA4Q14CN2 919 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 SMN1Q16637 294 aaKnown RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 DGUOKQ16854 277 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 PLEKHG6Q3KR16 790 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 SYT6Q5T7P8 510 aaPredicted RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 EIF3MQ7L2H7 374 aaKnown RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 P2RY8Q86VZ1 359 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 FAM217AQ8IXS0 508 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ATG16L2Q8NAA4 619 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 ZFP90Q8TF47 636 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 MYOCQ99972 504 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 DPH2Q9BQC3 489 aaPredicted RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 NEURL2Q9BR09 285 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 AKIP1Q9NQ31 210 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 KRT84Q9NSB2 600 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 KIF17Q9P2E2 1029 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
MSH5-201ENST00000375703 HTTP42858 3142 aa14.11□□□□□ -0.15
MSH5-201ENST00000375703 IGLV3-16A0A075B6K0 115 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SERTM1A2A2V5 107 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 GFYI3L273 518 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 MT-ND2P03891 347 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 MPC1LP0DKB6 136 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 JUPP14923 745 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ACPPP15309 386 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 LHCGRP22888 699 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 EPHA2P29317 976 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ALDH4A1P30038 563 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 HOXA9P31269 272 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 CTSOP43234 321 aaPredicted RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 STK19P49842 368 aaPredicted RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 ST13P50502 369 aaKnown RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 WNT3P56703 355 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 PAGE2BQ5JRK9 111 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 CBLL1Q75N03 491 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 CDC26Q8NHZ8 85 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SCLYQ96I15 445 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms