RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 POLR1DQ9Y2S0 133 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 OVOS2A0A0G2JMS6 1433 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 C17orf113A0A1B0GUU1 675 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 RPS10-NUDT3A0A1W2PQS6 291 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 OR6C6A6NF89 314 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 D6RAR5 112 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 H3BMQ9 156 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 GLP1RP43220 463 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 KCNC4Q03721 635 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 DCST2Q5T1A1 773 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 CHTF18Q8WVB6 975 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 GATA5Q9BWX5 397 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 PPP1R14DQ9NXH3 145 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 XKRYO14609 159 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 SCN2BO60939 215 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 CCR1P32246 355 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 IDH3GP51553 393 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 ISLR2Q6UXK2 745 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 LFNGQ8NES3 379 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 WDR55Q9H6Y2 383 aaPredicted RBP6.47□□□□□ -1.37
UBR4-204ENST00000375254 BCO1Q9HAY6 547 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 MS4A12Q9NXJ0 267 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 PTCH2Q9Y6C5 1203 aa6.47□□□□□ -1.37
UBR4-204ENST00000375254 ARVCFO00192 962 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 PCDH17O14917 1159 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 GYG1P46976 350 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 FCRLBQ6BAA4 426 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 GJB7Q6PEY0 223 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 ZNF852Q6ZMS4 543 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 DENND1CQ8IV53 801 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 OR10G2Q8NGC3 310 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 A0A1B0GVG6 124 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 GJE1A6NN92 205 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 NPIPA2E9PIF3 369 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 ZNF286BP0CG31 522 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 MANFP55145 182 aaKnown RBP6.46□□□□□ -1.37
UBR4-204ENST00000375254 ORC1Q13415 861 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 DUS3LQ96G46 650 aaKnown RBP6.46□□□□□ -1.37
UBR4-204ENST00000375254 MUS81Q96NY9 551 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 PLA2G12BQ9BX93 195 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 GREM2Q9H772 168 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 VAPAQ9P0L0 249 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 NARFQ9UHQ1 456 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 CLCA3PQ9Y6N3 262 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 USP17L5A8MUK1 530 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 PMM2O15305 246 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 CHATP28329 748 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 FHITP49789 147 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 IRF4Q15306 451 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 ENPP7Q6UWV6 458 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 TFAP2DQ7Z6R9 452 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 SLC41A1Q8IVJ1 513 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 LENG9Q96B70 501 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 IPPKQ9H8X2 491 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 RBFOX1Q9NWB1 397 aaKnown RBP6.46□□□□□ -1.37
UBR4-204ENST00000375254 GXYLT2A0PJZ3 443 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 NPC1O15118 1278 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 XKP51811 444 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 POU4F3Q15319 338 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 TKFCQ3LXA3 575 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 PPP1R26Q5T8A7 1209 aaPredicted RBP6.46□□□□□ -1.37
UBR4-204ENST00000375254 ATG9BQ674R7 924 aa6.46□□□□□ -1.37
UBR4-204ENST00000375254 UBE2R2Q712K3 238 aaPredicted RBP6.46□□□□□ -1.37
UBR4-204ENST00000375254 PTCH1Q13635 1447 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 A0A0G2JN53 185 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 F5H423 210 aaPredicted RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 CTRB1P17538 263 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 RASGEF1BQ0VAM2 473 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 CTRB2Q6GPI1 263 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 RBMS3Q6XE24 437 aaKnown RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 DCUN1D3Q8IWE4 304 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 ZCCHC2Q9C0B9 1178 aaKnown RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 DDIT4Q9NX09 232 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 MIOSQ9NXC5 875 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 ARL15Q9NXU5 204 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 LUZP4Q9P127 313 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 ZNF230Q9UIE0 474 aaPredicted RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 LYRM1O43325 122 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 MFSD10Q14728 455 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 VAMP3Q15836 100 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 H3F3CQ6NXT2 135 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 BRAT1Q6PJG6 821 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 TMEM200AQ86VY9 491 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 OR10H4Q8NGA5 316 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 AXLP30530 894 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 GSG1LQ6UXU4 331 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 IFNLR1Q8IU57 520 aaPredicted RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 ZC3H4Q9UPT8 1303 aaKnown RBP6.46□□□□□ -1.38
UBR4-204ENST00000375254 FANCD2Q9BXW9 1451 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 TCAPO15273 167 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 ATG12O94817 140 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 MT-CO1P00395 513 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 LCKP06239 509 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 CASP3P42574 277 aa6.46□□□□□ -1.38
UBR4-204ENST00000375254 ZFPM1Q8IX07 1006 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms