RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ARF3P61204 181 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-202ENST00000374426 CRADDP78560 199 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 EEF1A2Q05639 463 aaKnown RBP13.12□□□□□ -0.31
CXCL12-202ENST00000374426 DSG2Q14126 1118 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 INAQ16352 499 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 PCID2Q5JVF3 399 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 CTSL3PQ5NE16 218 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 MCEMP1Q8IX19 187 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 HAS2Q92819 552 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 CABS1Q96KC9 395 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
CXCL12-202ENST00000374426 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 HIVEP1P15822 2718 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 IGHV1-45A0A0A0MS14 117 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 IGKV1-8A0A0C4DH67 115 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 NDUFS3O75489 264 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 BMP10O95393 424 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 MATN4O95460 622 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 F10P00742 488 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ERGP11308 486 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ARNTP27540 789 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 GRNP28799 593 aaKnown RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 CMPK1P30085 196 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ZNF75DP51815 510 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 EMP3P54852 163 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 EIF3BP55884 814 aaKnown RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 SESN2P58004 480 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ART3Q13508 389 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 GBX1Q14549 363 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 NAA30Q147X3 362 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 AMER3Q8N944 861 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ITLN2Q8WWU7 325 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 BIRC8Q96P09 236 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 PLCD4Q9BRC7 762 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 FRMD8P1Q9BZ68 369 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 TSR3Q9UJK0 312 aaKnown RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 CDC14AQ9UNH5 594 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ZNF148Q9UQR1 794 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 RUVBL1Q9Y265 456 aaKnown RBP13.11□□□□□ -0.31
CXCL12-202ENST00000374426 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 HEATR5BQ9P2D3 2071 aa13.11□□□□□ -0.31
CXCL12-202ENST00000374426 ARHGEF33A8MVX0 844 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 WDPCPO95876 746 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 CXCR2P25025 360 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 MST1P26927 711 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 NMBRP28336 390 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 SLC26A3P40879 764 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 EFNA3P52797 238 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
CXCL12-202ENST00000374426 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 SNX1Q13596 522 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 NAA25Q14CX7 972 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 PCOLCEQ15113 449 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 HKDC1Q2TB90 917 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 SUSD1Q6UWL2 747 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 GFRALQ6UXV0 394 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 RIPOR1Q6ZS17 1223 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 PAQR7Q86WK9 346 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 ARHGEF39Q8N4T4 335 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 FAM136AQ96C01 138 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 MOCOSQ96EN8 888 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 YIPF2Q9BWQ6 316 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 TGIF2Q9GZN2 237 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.1□□□□□ -0.31
CXCL12-202ENST00000374426 C14orf105Q9NVL8 296 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 RIC8BQ9NVN3 520 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 PAK5Q9P286 719 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 KLF2Q9Y5W3 355 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-202ENST00000374426 MTORP42345 2549 aa13.1□□□□□ -0.31
CXCL12-202ENST00000374426 LOC102723996A0A087X1L8 192 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 PRPF4O43172 522 aaKnown RBP eCLIP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 FOXS1O43638 330 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 PHF2O75151 1096 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 NIPSNAP2O75323 286 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 VPS26AO75436 327 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 WFS1O76024 890 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 UNC5CO95185 931 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 HEXBP07686 556 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ITGAMP11215 1152 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ATP5DP30049 168 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
CXCL12-202ENST00000374426 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
CXCL12-202ENST00000374426 ZNF425Q6IV72 752 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms