RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 DENND6AQ8IWF6 608 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 PDIK1LQ8N165 341 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 RAB42Q8N4Z0 105 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 FAM136AQ96C01 138 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 SNF8Q96H20 258 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 CNDP1Q96KN2 507 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 KRT12Q99456 494 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 EBNA1BP2Q99848 306 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 RAB11FIP5Q9BXF6 653 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 COPG2Q9UBF2 871 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 PLCL2Q9UPR0 1127 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 SEC16AO15027 2179 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 ISM1B1AKI9 464 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 NDC80O14777 642 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 BANF1O75531 89 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 CCNFP41002 786 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 ETF1P62495 437 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 KIR2DS3Q14952 304 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 TTLL9Q3SXZ7 439 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 HSP90AA5PQ58FG0 334 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 SPANXN3Q5MJ09 141 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 HIBCHQ6NVY1 386 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 CNSTQ6PJW8 725 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 FAM180AQ6UWF9 173 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 FJX1Q86VR8 437 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 TMEM151BQ8IW70 566 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 DNAJC22Q8N4W6 341 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 DENND1AQ8TEH3 1009 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 DLG3Q92796 817 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 FKBP10Q96AY3 582 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 TRIM31Q9BZY9 425 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 LHPPQ9H008 270 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 SPHK1Q9NYA1 384 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 TSR3Q9UJK0 312 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC39A10Q9ULF5 831 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 COMMD10Q9Y6G5 202 aa18.36■□□□□ 0.53
TRAPPC3-204ENST00000373166 EFCAB8A8MWE9 144 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 RASGRF2O14827 1237 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 SEC31AO94979 1220 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 PIM1P11309 404 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 BDKRB1P46663 353 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 ITGA8P53708 1063 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 ARSFP54793 590 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 MSS51Q4VC12 460 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 SYT10Q6XYQ8 523 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 OVCH1Q7RTY7 1134 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 MAGEC3Q8TD91 643 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 RAD51AP1Q96B01 352 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 VPS50Q96JG6 964 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 WDR54Q9H977 334 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC22A11Q9NSA0 550 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 IARS2Q9NSE4 1012 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 CIDEBQ9UHD4 219 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 RUVBL2Q9Y230 463 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 NFS1Q9Y697 457 aa18.35■□□□□ 0.53
TRAPPC3-204ENST00000373166 CROCCQ5TZA2 2017 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 SOCS6O14544 535 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 ALOX12BO75342 701 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 ALBP02768 609 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 F7P08709 466 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 CD9P21926 228 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 GRNP28799 593 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 ARL4CP56559 192 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 MPP1Q00013 466 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 GRB7Q14451 532 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 GBX1Q14549 363 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC5A12Q1EHB4 618 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 TTLL10Q6ZVT0 673 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 PARP9Q8IXQ6 854 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 BCORP1Q8N888 145 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 OR2L8Q8NGY9 312 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 FLVCR1-AS1Q8TAF5 88 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 KCNJ9Q92806 393 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC22A18Q96BI1 424 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 LRRC39Q96DD0 335 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 IL17FQ96PD4 163 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLX1AQ9BQ83 275 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 OLAHQ9NV23 265 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 EURLQ9NYK6 297 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 CHMP2BQ9UQN3 213 aa18.34■□□□□ 0.53
TRAPPC3-204ENST00000373166 A0A1B0GX78 115 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 JRKO75564 520 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 C1orf105O95561 183 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 ERVK-10P10266 1014 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 CLCN7P51798 805 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 ART3Q13508 389 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 NKG7Q16617 165 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 ACSBG2Q5FVE4 666 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 RPUSD3Q6P087 351 aaKnown RBP18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 KIRREL2Q6UWL6 708 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 TAX1BP1Q86VP1 789 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 BBOF1Q8ND07 529 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 RELTQ969Z4 430 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 CERS2Q96G23 380 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 CFAP36Q96G28 342 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 MENTQ9BUN1 341 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 FAM114A2Q9NRY5 505 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZC3H7BQ9UGR2 993 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms