RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 JOSD2Q8TAC2 188 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 COPS8Q99627 209 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 FGFBP2Q9BYJ0 223 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 HCN2Q9UL51 889 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 DLG5Q8TDM6 1919 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 K7EPK0 472 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 FABP3P05413 133 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZDHHC11BP0C7U3 371 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 KLHL22Q53GT1 634 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZSWIM3Q96MP5 696 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 HEPHQ9BQS7 1158 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 WRAP53Q9BUR4 548 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 KLQ9UEF7 1012 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 hCG_1818297A0A087WSY0 165 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ADAM10O14672 748 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 TULP3O75386 442 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 C8BP07358 591 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 PEX2P28328 305 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ERVK-25P63136 954 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 NRSN1Q8IZ57 195 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 MARVELD2Q8N4S9 558 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 PTGR2Q8N8N7 351 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 C1orf216Q8TAB5 229 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 CPXM1Q96SM3 734 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 DZANK1Q9NVP4 752 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 MAT2BQ9NZL9 334 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 HTR3EA5X5Y0 456 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 BHLHE40O14503 412 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 WDPCPO95876 746 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 CYP17A1P05093 508 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 GLDCP23378 1020 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ADH6P28332 368 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC11A1P49279 550 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 IRF8Q02556 426 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 MRPL57Q9BQC6 102 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 BOLA2-SMG1P6H3BVE0 249 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 SBK2P0C263 348 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RYKP34925 604 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RABGGTBP53611 331 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RAB4BP61018 213 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 LRIF1Q5T3J3 769 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 GPR180Q86V85 440 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 SCGB1C1Q8TD33 95 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 IL12RB2Q99665 862 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 AGO3Q9H9G7 860 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZNF230Q9UIE0 474 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ALOX15BO15296 676 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 LYPLA1O75608 230 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 POP4O95707 220 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 HTR7P34969 479 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 CLCN5P51795 746 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PRKAG1P54619 331 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 TMEM44Q2T9K0 475 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 C11orf65Q8NCR3 313 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 CD101Q93033 1021 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 B3GNT4Q9C0J1 378 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 C14orf166Q9Y224 244 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 KCNU1A8MYU2 1149 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 E2F3O00716 465 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ENTPD6O75354 484 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PAK4O96013 591 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ADH5P11766 374 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PBX1P40424 430 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 E2F1Q01094 437 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 VTCN1Q7Z7D3 282 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 NETO2Q8NC67 525 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 COG8Q96MW5 612 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 CD320Q9NPF0 282 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RIIAD1A6NNX1 92 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 INMT-MINDY4F8WBC2 141 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 FPGTO14772 594 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 IDSP22304 550 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 DNASE1P24855 282 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 MAT2AP31153 395 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 ETV1P50549 477 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PPP5CP53041 499 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 RAB10P61026 200 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 SP140Q13342 867 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 PDGFRLQ15198 375 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 SCGB2B2Q4G0G5 96 aa13.72□□□□□ -0.21
RAPGEF1-202ENST00000372190 GLYATQ6IB77 296 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms