RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 BBIP1A8MTZ0 92 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 CDH1P12830 882 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 CTSEP14091 401 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 ITGAXP20702 1163 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 ELF3P78545 371 aaPredicted RBP25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 SIGLEC14Q08ET2 396 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 CYP20A1Q6UW02 462 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 LAS2Q8IYD9 372 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 MTERF1Q99551 399 aaKnown RBP25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 PELI2Q9HAT8 420 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 SPATA6Q9NWH7 488 aaPredicted RBP25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 DLGAP2Q9P1A6 1054 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 VPS29Q9UBQ0 182 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 PLXND1Q9Y4D7 1925 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 A0A1W2PPV9 198 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 NRP2O60462 931 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 G6PDP11413 515 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 PCNAP12004 261 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 MAPK1P28482 360 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 DDX39BQ13838 428 aaKnown RBP25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 BLOC1S3Q6QNY0 202 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 KRT78Q8N1N4 520 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 METTL2AQ96IZ6 378 aaKnown RBP25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 HSPA12BQ96MM6 686 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 NRTNQ99748 197 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 XKR8Q9H6D3 395 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 ZNF624Q9P2J8 865 aaPredicted RBP25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 KLF15Q9UIH9 416 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 ICKQ9UPZ9 632 aa25.36■■□□□ 1.65
ATPAF1-202ENST00000371937 A0A1W2PR77 199 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 PIPSLA2A3N6 862 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 CXCR2P25025 360 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 HOXA6P31267 233 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 UFM1P61960 85 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 KIAA0040Q15053 153 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 FAM9CQ8IZT9 166 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 HUS1BQ8NHY5 278 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 THTPAQ9BU02 230 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 TCEAL2Q9H3H9 227 aaPredicted RBP25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 PCDHB11Q9Y5F2 797 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 NR5A2O00482 541 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 ACPPP15309 386 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 SHMT2P34897 504 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 KCNK10P57789 538 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 ZNF542PQ5EBM4 170 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 IYDQ6PHW0 289 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 DEFB107AQ8IZN7 70 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 DSELQ8IZU8 1212 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 ABHD11Q8NFV4 315 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 PRM3Q9NNZ6 103 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 NMRK1Q9NWW6 199 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 OR6C2Q9NZP2 312 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 TAAR2Q9P1P5 351 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 NDUFAF1Q9Y375 327 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 TSC22D4Q9Y3Q8 395 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 PCM1Q15154 2024 aa25.35■■□□□ 1.65
ATPAF1-202ENST00000371937 CCDC163A0A0D9SF12 145 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 OR5K4A6NMS3 321 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 FOXE1O00358 373 aaPredicted RBP25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 RASSF9O75901 435 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 SLC19A1P41440 591 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 CCR8P51685 355 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 PHEXP78562 749 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 RCAN2Q14206 197 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 CWF19L1Q69YN2 538 aaKnown RBP25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 FAM129CQ86XR2 697 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 C10orf67Q8IYJ2 551 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 PCYOX1LQ8NBM8 494 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 PROKR1Q8TCW9 393 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 ZFPM2Q8WW38 1151 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 LCN9Q8WX39 176 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 NPAS2Q99743 824 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 MIR1-1HGQ9H1L0 117 aa25.34■■□□□ 1.65
ATPAF1-202ENST00000371937 PRAMEF33A0A0G2JMD5 474 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 DYTNA2CJ06 578 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 FAM234BA2RU67 622 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 MAGEB17A8MXT2 336 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 TLR4O00206 839 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 WNT1P04628 370 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 PRPS2P11908 318 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 JUNDP17535 347 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 JAK1P23458 1154 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 MAOBP27338 520 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 POLR2JP52435 117 aaKnown RBP25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 PRDX1Q06830 199 aaKnown RBP25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 ICE2Q659A1 982 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 REP15Q6BDI9 236 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 TMIGD1Q6UXZ0 262 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 TAF8Q7Z7C8 310 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 SCUBE1Q8IWY4 988 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 AIF1LQ9BQI0 150 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 PITHD1Q9GZP4 211 aaPredicted RBP25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 TM9SF3Q9HD45 589 aa25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 APOBEC3BQ9UH17 382 aaKnown RBP25.33■■□□□ 1.65
ATPAF1-202ENST00000371937 FBP2O00757 339 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 ANGPT2O15123 496 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 XRCC1P18887 633 aaPredicted RBP25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 PIK3CBP42338 1070 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 COQ5Q5HYK3 327 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 AMIGO1Q86WK6 493 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms