RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 COL26A1Q96A83 441 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 PNPLA2Q96AD5 504 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 EBNA1BP2Q99848 306 aaKnown RBP16.32■□□□□ 0.2
LRRC42-202ENST00000371368 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
LRRC42-202ENST00000371368 ZNF552Q9H707 407 aaPredicted RBP16.32■□□□□ 0.2
LRRC42-202ENST00000371368 ABCF3Q9NUQ8 709 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 LUZP4Q9P127 313 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 CTSFQ9UBX1 484 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 PCYOX1Q9UHG3 505 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 VPS4AQ9UN37 437 aa16.32■□□□□ 0.2
LRRC42-202ENST00000371368 VSTM2BA6NLU5 285 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 SMAPO00193 183 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 SOCS6O14544 535 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 BANF1O75531 89 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 ALPPP05187 535 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 SKIV2L2P42285 1042 aaKnown RBP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 EMP3P54852 163 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 ABATP80404 500 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 SRSF1Q07955 248 aaKnown RBP eCLIP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 MUM1Q2TAK8 710 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 PRTGQ2VWP7 1150 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 MSS51Q4VC12 460 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 SPANXN3Q5MJ09 141 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 ZNF425Q6IV72 752 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 PRMT9Q6P2P2 845 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 UBE2R2Q712K3 238 aaPredicted RBP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 GALNT11Q8NCW6 608 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 UTP6Q9NYH9 597 aaKnown RBP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 TRMT6Q9UJA5 497 aaKnown RBP16.31■□□□□ 0.2
LRRC42-202ENST00000371368 FBXL4Q9UKA2 621 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 HS3ST3B1Q9Y662 390 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 PCM1Q15154 2024 aa16.31■□□□□ 0.2
LRRC42-202ENST00000371368 ANKRD12Q6UB98 2062 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 HECTD1Q9ULT8 2610 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 USP27XA6NNY8 438 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 EIF3FO00303 357 aaPredicted RBP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 TTC4O95801 387 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 IVDP26440 423 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 GABRB3P28472 473 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 CARSP49589 748 aaKnown RBP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 TIAL1Q01085 375 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 RELAQ04206 551 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 OCA2Q04671 838 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 AIMP2Q13155 320 aaKnown RBP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 PLEKHN1Q494U1 663 aaPredicted RBP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 UGT3A1Q6NUS8 523 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 KIRREL2Q6UWL6 708 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 IGFL3Q6UXB1 125 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 IGDCC3Q8IVU1 814 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 CSNK1A1LQ8N752 337 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 GABPB2Q8TAK5 448 aaPredicted RBP16.3■□□□□ 0.2
LRRC42-202ENST00000371368 STT3BQ8TCJ2 826 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 EEF1AKMT1Q8WVE0 214 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 CABS1Q96KC9 395 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 C10orf90Q96M02 699 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 OR2A5Q96R48 311 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 NAT9Q9BTE0 207 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 SYNPO2LQ9H987 977 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 SEMA3GQ9NS98 782 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 CDC14AQ9UNH5 594 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 NBASA2RRP1 2371 aa16.3■□□□□ 0.2
LRRC42-202ENST00000371368 ALOX12BO75342 701 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 IPO13O94829 963 aaKnown RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 AHSGP02765 367 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 ZGLP1P0C6A0 271 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 FBLP22087 321 aaKnown RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 GNLYP22749 145 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 ITGA3P26006 1051 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 IMPA1P29218 277 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 RGS4P49798 205 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 KLC1Q07866 573 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 RBBP7Q16576 425 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 PRR30Q53SZ7 412 aaPredicted RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 THEMIS2Q5TEJ8 643 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 PRAMEF13Q5VWM6 474 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 FAM26EQ8N5C1 309 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 MCOLN3Q8TDD5 553 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 MIEF2Q96C03 454 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 VPS50Q96JG6 964 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 NDNQ99608 321 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 CRB3Q9BUF7 120 aa16.29■□□□□ 0.2
LRRC42-202ENST00000371368 CUEDC1Q9NWM3 386 aaPredicted RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 ZNF282Q9UDV7 671 aaPredicted RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 RUVBL1Q9Y265 456 aaKnown RBP16.29■□□□□ 0.2
LRRC42-202ENST00000371368 H7BY64 318 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 EZRP15311 586 aaKnown RBP16.28■□□□□ 0.2
LRRC42-202ENST00000371368 VARSP26640 1264 aaKnown RBP16.28■□□□□ 0.2
LRRC42-202ENST00000371368 UQCRFS1P47985 274 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 GNG11P61952 73 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 TUBB8Q3ZCM7 444 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 VWA2Q5GFL6 755 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 RBM20Q5T481 1227 aaKnown RBP16.28■□□□□ 0.2
LRRC42-202ENST00000371368 LRRC8EQ6NSJ5 796 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 PAQR3Q6TCH7 311 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 KIAA0408Q6ZU52 694 aa16.28■□□□□ 0.2
LRRC42-202ENST00000371368 SYDE1Q6ZW31 735 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms