RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 HERVK_113P63132 956 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF792Q3KQV3 632 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TXNRD3NBQ6F5E7 133 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OR52E4Q8NGH9 312 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GAL3ST3Q96A11 431 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 NSMCE3Q96MG7 304 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CCDC28BQ9BUN5 200 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GATA5Q9BWX5 397 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ERVK-6Q9BXR3 956 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TPSD1Q9BZJ3 242 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GPN1Q9HCN4 374 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 IL1RAPQ9NPH3 570 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TRPV5Q9NQA5 729 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CORO1CQ9ULV4 474 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GPR34Q9UPC5 381 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 WBP11Q9Y2W2 641 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TMEM233B4DJY2 109 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GPR89AB7ZAQ6 455 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 AHCYL1O43865 530 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 LEFTY1O75610 366 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 RFPL2O75678 378 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GJB5O95377 273 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GPR89BP0CG08 455 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CDH1P12830 882 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HNRNPH3P31942 346 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ACSL1P33121 698 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 RFC2P35250 354 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HSD17B2P37059 387 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PON2Q15165 354 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ABCA11PQ4W5N1 156 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CARD17Q5XLA6 110 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 NKD2Q969F2 451 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CDKN2AIPNLQ96HQ2 116 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ZFP3Q96NJ6 502 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 RAD9AQ99638 391 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 MGME1Q9BQP7 344 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OR51B5Q9H339 312 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HRASLS2Q9NWW9 162 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 LOC100509620A0A075B734 347 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 A0A1W2PPL8 197 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 MAP2K7O14733 419 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 COCHO43405 550 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SNAI1O95863 264 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 BCAP31P51572 246 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 JAG1P78504 1218 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TPRG1Q6ZUI0 275 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CMTM7Q96FZ5 175 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 FARSBQ9NSD9 589 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 IFT80Q9P2H3 777 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PCDHGB5Q9Y5G0 923 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ANKRD66B4E2M5 251 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 KMOO15229 486 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 KDELR3O43731 214 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HAPLN1P10915 354 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ETV3P41162 512 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 DSTNP60981 165 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SPIN3Q5JUX0 258 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 C1orf189Q5VU69 101 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 C1orf216Q8TAB5 229 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TNFAIP8L1Q8WVP5 186 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SORCS1Q8WY21 1168 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 IGSF9Q9P2J2 1179 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 COMMD3-BMI1R4GMX3 469 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OR1I1O60431 355 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 EDNRAP25101 427 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 RPS9P46781 194 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OLR1P78380 273 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CDKL1Q00532 357 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 DCTN2Q13561 401 aaKnown RBP8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HMGN2P46Q86SG4 172 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PGAM4Q8N0Y7 254 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OXR1Q8N573 874 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 C12orf42Q96LP6 360 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 ANKRD27Q96NW4 1050 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GABRDO14764 452 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 PLD2O14939 933 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 GRID2O43424 1007 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CPNE6O95741 557 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SCGB1D2O95969 90 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 DGKQP52824 942 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OR12D2P58182 307 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 C5orf22Q49AR2 442 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 CRB2Q5IJ48 1285 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 LAPTM4BQ86VI4 370 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 HPS1Q92902 700 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 RIT1Q92963 219 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 FCRL5Q96RD9 977 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SLC2A4RGQ9NR83 387 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
ABCA4-201ENST00000370225 OR6C74A6NCV1 312 aa8.32□□□□□ -1.08
ABCA4-201ENST00000370225 LOC730098B7Z3J9 87 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms