RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MYDGFQ969H8 173 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 COL26A1Q96A83 441 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RGMAQ96B86 450 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPL48Q96GC5 212 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NECTIN4Q96NY8 510 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC39A3Q9BRY0 314 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ADI1Q9BV57 179 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C1QTNF1Q9BXJ1 281 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SRMSQ9H3Y6 488 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GPRC5BQ9NZH0 403 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CALML5Q9NZT1 146 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DKK3Q9UBP4 350 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 A0A1W2PRB8 838 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 FAM149AA5PLN7 773 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PDPK1O15530 556 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NUAK1O60285 661 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 IFNW1P05000 195 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CA3P07451 260 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 IGFBP5P24593 272 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ITGB7P26010 798 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HLA-FP30511 346 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SOX6P35712 828 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CAPGP40121 348 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 VIPR2P41587 438 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 IDH2P48735 452 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NEK2P51955 445 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 UGT2B15P54855 530 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPS15P82914 257 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PRR5P85299 388 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ITGADQ13349 1161 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HNRNPA1L2Q32P51 320 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TIMM50Q3ZCQ8 353 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ATG9BQ674R7 924 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MSANTD1Q6ZTZ1 278 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BHLHA9Q7RTU4 235 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZDHHC21Q8IVQ6 265 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PDPRQ8NCN5 879 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 GPR26Q8NDV2 337 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PIK3C3Q8NEB9 887 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ACVR1CQ8NER5 493 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 OR5K1Q8NHB7 308 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SORCS1Q8WY21 1168 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 FBXL8Q96CD0 374 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC45A3Q96JT2 553 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF347Q96SE7 839 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C19orf43Q9BQ61 176 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 FNDC11Q9BVV2 318 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BOCQ9BWV1 1114 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 KCNH6Q9H252 994 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 POLR1BQ9H9Y6 1135 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CARS2Q9HA77 564 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PDFQ9HBH1 243 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SEC14L3Q9UDX4 400 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 GIMAP2Q9UG22 337 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 IKZF3Q9UKT9 509 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SNX7Q9UNH6 387 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DICER1Q9UPY3 1922 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC14BA6NHZ5 514 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 AP3D1O14617 1153 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 OR10H2O60403 315 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SERPINA1P01009 418 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PABPC4LP0CB38 370 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C6P13671 934 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ADRB3P13945 408 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HSD17B1P14061 328 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C5AR1P21730 350 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HTR1EP28566 365 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MAT2AP31153 395 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PGFP49763 221 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CDKL1Q00532 357 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CREB5Q02930 508 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 RPA4Q13156 261 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 GRM2Q14416 872 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC9A5Q14940 896 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 IFI44LQ53G44 452 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 USP39Q53GS9 565 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PIGGQ5H8A4 983 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 GPR107Q5VW38 600 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ALG1LQ6GMV1 187 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NANOGP8Q6NSW7 305 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CD300LGQ6UXG3 332 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 UNC5DQ6UXZ4 953 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PLPP6Q8IY26 295 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TMIEQ8NEW7 156 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 OR52B6Q8NGF0 335 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 RHBDF1Q96CC6 855 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF689Q96CS4 500 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MOCOSQ96EN8 888 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MCMBPQ9BTE3 642 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 YTHDF1Q9BYJ9 559 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NANOGQ9H9S0 305 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CLN6Q9NWW5 311 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SPATA7Q9P0W8 599 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CDH7Q9ULB5 785 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 A0A096LPI6 279 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CXorf51AA0A1B0GTR3 108 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 KPNA4O00629 521 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HTRA2O43464 458 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 B4GALT3O60512 393 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms