RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIAA0930Q6ICG6 404 aaPredicted RBP15.26■□□□□ 0.03
CKS1B-202ENST00000368436 RPUSD3Q6P087 351 aaKnown RBP15.26■□□□□ 0.03
CKS1B-202ENST00000368436 LAPTM4BQ86VI4 370 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 FAR1Q8WVX9 515 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 SMPDL3AQ92484 453 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 MVB12AQ96EY5 273 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ACAT2Q9BWD1 397 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 SYNPO2LQ9H987 977 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF160Q9HCG1 818 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 C3orf18Q9UK00 162 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 CDC14AQ9UNH5 594 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 CRYL1Q9Y2S2 319 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ZGRF1Q86YA3 2104 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ITPR2Q14571 2701 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CPAMD8Q8IZJ3 1885 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 IGKV1-8A0A0C4DH67 115 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 PKMP14618 531 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 FBLP22087 321 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 HSD17B2P37059 387 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 MAGEA6P43360 314 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 RELAQ04206 551 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 PRDX1Q06830 199 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 KLHL38Q2WGJ6 581 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF425Q6IV72 752 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 SUSD1Q6UWL2 747 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 LINC00696Q6ZRV3 163 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF662Q6ZS27 426 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CENPUQ71F23 418 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 NDUFAF7Q7L592 441 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 PAQR7Q86WK9 346 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CILP2Q8IUL8 1156 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 KBTBD2Q8IY47 623 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CATSPER1Q8NEC5 780 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 PSMF1Q92530 271 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 FAM136AQ96C01 138 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 C8orf44Q96CB5 159 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CABS1Q96KC9 395 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 TRIM56Q9BRZ2 755 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 MRPS30Q9NP92 439 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 FAM114A2Q9NRY5 505 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 HOMER3Q9NSC5 361 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 TSR3Q9UJK0 312 aaKnown RBP15.25■□□□□ 0.03
CKS1B-202ENST00000368436 CROCCQ5TZA2 2017 aa15.25■□□□□ 0.03
CKS1B-202ENST00000368436 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 PRPF4O43172 522 aaKnown RBP eCLIP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 VPS26AO75436 327 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 COX6A1P12074 109 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 RPA3P35244 121 aaPredicted RBP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 SLC26A3P40879 764 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 CLCN7P51798 805 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 EMP2P54851 167 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 DSG2Q14126 1118 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 KCNJ11Q14654 390 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 NEK10Q6ZWH5 1172 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 PRSS58Q8IYP2 241 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 ARHGEF39Q8N4T4 335 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 CSNK1A1LQ8N752 337 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 FBXO15Q8NCQ5 510 aaPredicted RBP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 CNDP1Q96KN2 507 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 OR2A5Q96R48 311 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 PKP4Q99569 1192 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 SLX1AQ9BQ83 275 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 TGIF2Q9GZN2 237 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 INTS10Q9NVR2 710 aaKnown RBP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 RUVBL1Q9Y265 456 aaKnown RBP15.24■□□□□ 0.03
CKS1B-202ENST00000368436 VPS9D1Q9Y2B5 631 aa15.24■□□□□ 0.03
CKS1B-202ENST00000368436 NSG1A0A0A6YYJ2 146 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 IDSB3KWA1 339 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 AVILO75366 819 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 USP1O94782 785 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 CATP04040 527 aaKnown RBP15.23■□□□□ 0.03
CKS1B-202ENST00000368436 PRR35P0CG20 571 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 FDXRP22570 491 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 SOX11P35716 441 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 PNLIPRP1P54315 467 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 KCTD19Q17RG1 926 aaPredicted RBP15.23■□□□□ 0.03
CKS1B-202ENST00000368436 HKDC1Q2TB90 917 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 GARNL3Q5VVW2 1013 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 ICE2Q659A1 982 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 NEPROQ6NW34 567 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 CAND1Q86VP6 1230 aaKnown RBP15.23■□□□□ 0.03
CKS1B-202ENST00000368436 AMER3Q8N944 861 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 PRELID2Q8N945 189 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF480Q8WV37 535 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 SLC30A3Q99726 388 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 C14orf105Q9NVL8 296 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
CKS1B-202ENST00000368436 KLHL42Q9P2K6 505 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 TRPC4Q9UBN4 977 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 TAC3Q9UHF0 121 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 OSGIN2Q9Y236 505 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 CENPEQ02224 2701 aa15.23■□□□□ 0.03
CKS1B-202ENST00000368436 DIDO1Q9BTC0 2240 aaKnown RBP15.23■□□□□ 0.03
CKS1B-202ENST00000368436 LOC102723996A0A087X1L8 192 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 IGHV1-45A0A0A0MS14 117 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 FAM237BA0A1B0GVD1 139 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 MAGEB16A2A368 324 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF839A8K0R7 811 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms