RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 COLGALT2Q8IYK4 626 aa11.37□□□□□ -0.59
COPA-202ENST00000368069 ART5Q96L15 291 aa11.37□□□□□ -0.59
COPA-202ENST00000368069 PRICKLE1Q96MT3 831 aaPredicted RBP11.37□□□□□ -0.59
COPA-202ENST00000368069 IL4I1Q96RQ9 567 aa11.37□□□□□ -0.59
COPA-202ENST00000368069 POLR2J3Q9H1A7 115 aaKnown RBP11.37□□□□□ -0.59
COPA-202ENST00000368069 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
COPA-202ENST00000368069 INSL5Q9Y5Q6 135 aa11.37□□□□□ -0.59
COPA-202ENST00000368069 PRSS51A0A1B0GVH4 220 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 M0QX08 132 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SLC30A4O14863 429 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 MATN4O95460 622 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 GBAP04062 536 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CDKN1CP49918 316 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 DSTNP60981 165 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 RAB41Q5JT25 222 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 C6orf141Q5SZD1 244 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ATG9BQ674R7 924 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PLET1Q6UQ28 207 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 MRPL10Q7Z7H8 261 aaKnown RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SMYD1Q8NB12 490 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 NFKBIDQ8NI38 313 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CNIH3Q8TBE1 160 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 FCRL4Q96PJ5 515 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CCM2Q9BSQ5 444 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ITPAQ9BY32 194 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 SDR39U1Q9NRG7 319 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 SRRDQ9UH36 339 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 POFUT2Q9Y2G5 429 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3DA0A087WVF3 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3IA0A087WXS9 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3EA0A087X179 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3KA0A087X1G2 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3FA6NER0 549 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3LB9A6J9 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 FOXD2O60548 495 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 STC2O76061 302 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 INMTO95050 263 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SNX4O95219 450 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PDYNP01213 254 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 KLK1P06870 262 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3HP0C7X1 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 IDSP22304 550 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 STT3AP46977 705 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 DGKEP52429 567 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SKP1P63208 163 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3GQ6DHY5 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3CQ6IPX1 549 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PSRC1Q6PGN9 363 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 FAM124AQ86V42 546 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CNTN4Q8IWV2 1026 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TBC1D3Q8IZP1 549 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 OVCA2Q8WZ82 227 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ZBED6CLQ96FA7 236 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TRIM39Q9HCM9 518 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SNTG1Q9NSN8 517 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TRBC2A0A5B9 178 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ZNF840PA6NDX5 716 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PLOD3O60568 738 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 IFNA16P05015 189 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CD247P20963 164 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PREPP48147 710 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 RTP2Q5QGT7 225 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 KIAA1614Q5VZ46 1190 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PGM2L1Q6PCE3 622 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PKP4Q99569 1192 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ITM2CQ9NQX7 267 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 MRPL39Q9NYK5 338 aaKnown RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 TMEM181Q9P2C4 612 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 OR10H1Q9Y4A9 318 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 COL4A1P02462 1669 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 A0A096LPI6 279 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TFPTP0C1Z6 253 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CTSEP14091 401 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 MYF6P23409 242 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 HTR1BP28222 390 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 HLCSP50747 726 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CLCN2P51788 898 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 INHBCP55103 352 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ERVPABLB-1P60509 514 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CDK6Q00534 326 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 MYBPC1Q00872 1141 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 IL18Q14116 193 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ZFP69Q49AA0 526 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 HLA-DQA1Q5Y7H0 255 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 ALKAL1Q6UXT8 129 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 CXXC5Q7LFL8 322 aaKnown RBP11.36□□□□□ -0.59
COPA-202ENST00000368069 CLEC14AQ86T13 490 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 TMIGD2Q96BF3 282 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 NUS1Q96E22 293 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 SMG9Q9H0W8 520 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms