RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SRPK3Q9UPE1 567 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 MTO1Q9Y2Z2 717 aaKnown RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 SDK2Q58EX2 2172 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 AHCTF1Q8WYP5 2266 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PTPRQQ9UMZ3 2332 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ZFYVE26Q68DK2 2539 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ESYT3A0FGR9 886 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PABPN1LA6NDY0 278 aaKnown RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 ZSCAN9O15535 394 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 CTSVO60911 334 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PIAS1O75925 651 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 CCNDBP1O95273 360 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 C1QAP02745 245 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ENO2P09104 434 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 PRKAR1AP10644 381 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 SFTPCP11686 197 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ALAS2P22557 587 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 HRH2P25021 359 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 SPRP35270 261 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 CCR10P46092 362 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PGGT1BP53609 377 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 SLC12A2P55011 1212 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 AP1S2P56377 157 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 TAS2R39P59534 338 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 POU4F1Q01851 419 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 CDC20Q12834 499 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 LY6DQ14210 128 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 GRM7Q14831 915 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PTCHD3Q3KNS1 767 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 THEMIS2Q5TEJ8 643 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 YOD1Q5VVQ6 348 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 FRMPD2BQ6IN97 320 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 CEP128Q6ZU80 1094 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 SYVN1Q86TM6 617 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 NOA1Q8NC60 698 aaKnown RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 PROKR1Q8TCW9 393 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 FBF1Q8TES7 1133 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 APOBEC4Q8WW27 367 aaKnown RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 GBP5Q96PP8 586 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ZFYVE21Q9BQ24 234 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 SELENOSQ9BQE4 189 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 PCBD2Q9H0N5 130 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 GPAMQ9HCL2 828 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 TXLNGQ9NUQ3 528 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 TMEM184CQ9NVA4 438 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 ARL15Q9NXU5 204 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 STOX2Q9P2F5 926 aaPredicted RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 DHCR7Q9UBM7 475 aaKnown RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 TCFL5Q9UL49 500 aa9.44□□□□□ -0.9
CD48-202ENST00000368046 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
CD48-202ENST00000368046 MGAQ8IWI9 3026 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 LOC105369274A0A096LPK9 316 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 IGKV1-8A0A0C4DH67 115 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 LOC102723532A0A0G2JNH3 316 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 FITM1A5D6W6 292 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 H7BY64 318 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ONECUT2O95948 504 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 FURINP09958 794 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 PIM1P11309 404 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 NPPBP16860 134 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ZNF37AP17032 561 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 CCND1P24385 295 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 GP5P40197 560 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 GCGRP47871 477 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 VSX2P58304 361 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 NAE1Q13564 534 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 USP10Q14694 798 aaKnown RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 PHKG1Q16816 387 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 DEFB109BQ30KR1 87 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 KBTBD12Q3ZCT8 623 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 NKAIN1Q4KMZ8 207 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 C1orf189Q5VU69 101 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 MLIPQ5VWP3 458 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ZNF425Q6IV72 752 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 CAPN13Q6MZZ7 669 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 TTLL10Q6ZVT0 673 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 RNF44Q7L0R7 432 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 PAQR7Q86WK9 346 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 RELL1Q8IUW5 271 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 CEP97Q8IW35 865 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 CTAGE3PQ8IX95 158 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 OR4N4Q8N0Y3 316 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ENDOVQ8N8Q3 282 aaKnown RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 TTC29Q8NA56 475 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 ATL1Q8WXF7 558 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 THAP4Q8WY91 577 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 IFT81Q8WYA0 676 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 MED8Q96G25 268 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 PRAP1Q96NZ9 151 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 OR2A5Q96R48 311 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 RBBP8Q99708 897 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 DHRS4Q9BTZ2 278 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ATG10Q9H0Y0 220 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ACTL8Q9H568 366 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms