RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 OR56A1Q8NGH5 318 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 KLHDC7BQ96G42 594 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 COL21A1Q96P44 957 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 CMKLR1Q99788 373 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 RIMKLBQ9ULI2 386 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 C14orf166Q9Y224 244 aaKnown RBP15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 FABP12A6NFH5 140 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SRCP12931 536 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 BDKRB1P46663 353 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 MYLK3Q32MK0 819 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC9A4Q6AI14 798 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 LINC00471Q8N535 108 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 OR2AP1Q8NGE2 309 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 C2orf71A6NGG8 1288 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 ALPIP09923 528 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A1P22309 533 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 AZGP1P25311 298 aaKnown RBP15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 ELOCQ15369 112 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 NOXRED1Q6NXP6 359 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 FRMD7Q6ZUT3 714 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC44A3Q8N4M1 653 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 OR4E2Q8NGC2 313 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 LRTOMTQ8WZ04 291 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 MED11Q9P086 117 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 CAPN8A6NHC0 703 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SCGB1D2O95969 90 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 MT-ND1P03886 318 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 CA9Q16790 459 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SCAMP5Q8TAC9 235 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 CEP76Q8TAP6 659 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SUSD3Q96L08 255 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 DZANK1Q9NVP4 752 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 FZD4Q9ULV1 537 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 B4GALT2O60909 372 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 SCGB2A1O75556 95 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 KLK1P06870 262 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 ERVK-8P63133 956 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 MAD2L1BPQ15013 274 aaPredicted RBP15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 LRIF1Q5T3J3 769 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 PLEKHA6Q9Y2H5 1048 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 MAU2Q9Y6X3 613 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 HERVK_113P63132 956 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 RBM48Q5RL73 367 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 RBM15BQ8NDT2 890 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 AKAP1Q92667 903 aaKnown RBP eCLIP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 COPS4Q9BT78 406 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ERVK-6Q9BXR3 956 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC32A1Q9H598 525 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 FLRT1Q9NZU1 646 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 KANTRA0A1W2PQU2 76 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC22A2O15244 555 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 HSPA12AO43301 675 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CSN2P05814 226 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ASPAP45381 313 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 MTPNP58546 118 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 RPS24P62847 133 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 PHOSPHO1Q8TCT1 267 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 GEMIN6Q8WXD5 167 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 GFM1Q96RP9 751 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 BRF2Q9HAW0 419 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 GRHPRQ9UBQ7 328 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ATRNO75882 1429 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 A0A1B0GVI7 797 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 MMP20O60882 483 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 IDH3AP50213 366 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 NRLP54845 237 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CLEC12AQ5QGZ9 265 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CLNKQ7Z7G1 428 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF611Q8N823 705 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 INO80EQ8NBZ0 244 aaPredicted RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 NTAN1Q96AB6 310 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ESAMQ96AP7 390 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 FEM1AQ9BSK4 669 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 KAT8Q9H7Z6 458 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 FNIP2Q9P278 1114 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 Q9Y3F1 56 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 TLR4O00206 839 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CLPXO76031 633 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC6A4P31645 630 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 MAZP56270 477 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CLRN1P58418 232 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 RUNDC3AQ59EK9 446 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 TMCO2Q7Z6W1 182 aaPredicted RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 OR8H1Q8NGG4 311 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC6A15Q9H2J7 730 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 SCNN1AP37088 669 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 EIF1AXP47813 144 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 CSTF1Q05048 431 aaKnown RBP15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 TEAD2Q15562 447 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 ANKRD22Q5VYY1 191 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 GPAT4Q86UL3 456 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 THOC6Q86W42 341 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms