RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 FNDC11Q9BVV2 318 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SEZ6LQ9BYH1 1024 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 IL25Q9H293 177 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 DPAGT1Q9H3H5 408 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 MBNL1Q9NR56 388 aaKnown RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 ECHDC1Q9NTX5 307 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR2W1Q9Y3N9 320 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 LIPGQ9Y5X9 500 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 WDFY4Q6ZS81 3184 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 FAM170AA1A519 330 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 MYMKA6NI61 221 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TRIM77I1YAP6 450 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 OVOL3O00110 214 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TSPAN1O60635 241 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 OAZ2O95190 189 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 PENKP01210 267 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 CXCL10P02778 98 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ACAA1P09110 424 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR52Z1P0C646 297 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 SUPT20HL2P0C7V6 817 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 DANCRP0C864 163 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 RFC2P35250 354 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TDO2P48775 406 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF75DP51815 510 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 EGR4Q05215 589 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 BFSP1Q12934 665 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 DLG1Q12959 904 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 PLA2G7Q13093 441 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF234Q14588 700 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 PLA2G4FQ68DD2 849 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZSCAN25Q6NSZ9 544 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TRNP1Q6NT89 227 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 SHQ1Q6PI26 577 aaKnown RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 FAM198BQ6UWH4 519 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF704Q6ZNC4 412 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 C9orf47Q6ZRZ4 202 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 MEPCEQ7L2J0 689 aaKnown RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM219Q86XT9 240 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 GBGT1Q8N5D6 347 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 GOT1L1Q8NHS2 421 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 B4GALNT2Q8NHY0 566 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 PHF21AQ96BD5 680 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 SPDL1Q96EA4 605 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF558Q96NG5 402 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 NTPCRQ9BSD7 190 aaKnown RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 WNT5BQ9H1J7 359 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 UBE2ZQ9H832 354 aaPredicted RBP5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 OSER1Q9NX31 292 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 NPAP1Q9NZP6 1156 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 MTUS1Q9ULD2 1270 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 CCPG1Q9ULG6 757 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 YIPF1Q9Y548 306 aa5.34□□□□□ -1.55
RNU4-39P-201ENST00000362455 TRIOO75962 3097 aa5.34□□□□□ -1.56
RNU4-39P-201ENST00000362455 TTC3P53804 2025 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 MYH1P12882 1939 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 A0A0G2JPF8 293 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 HNRNPCL3B7ZW38 293 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF587BE7ETH6 402 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 LDB3O75112 727 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 HMMRO75330 724 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 GJB5O95377 273 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 BMP10O95393 424 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 FAM106CPP0CH98 169 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 HNRNPCL4P0DMR1 293 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 CDK4P11802 303 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 FCGR1AP12314 374 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ITGA2P17301 1181 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 HSPA4P34932 840 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 MTHFRP42898 656 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 POLGP54098 1239 aaPredicted RBP5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 LINC00205P59089 165 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 RPS6P62753 249 aaKnown RBP5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 TUBA1BP68363 451 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 KRT83P78385 493 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 RBPJQ06330 500 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ARHGAP1Q07960 439 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ACSM1Q08AH1 577 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF273Q14593 569 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 AWAT2Q6E213 333 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 CAVIN1Q6NZI2 390 aaKnown RBP5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 PPP1R21Q6ZMI0 780 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZBTB49Q6ZSB9 765 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ADCK2Q7Z695 626 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 SATL1Q86VE3 508 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 MFN1Q8IWA4 741 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 IQUBQ8NA54 791 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 BBS10Q8TAM1 723 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 SETD6Q8TBK2 473 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 ELP5Q8TE02 316 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 DEPDC1BQ8WUY9 529 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 TMEM255BQ8WV15 326 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 SMPDL3BQ92485 455 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 SEMA4DQ92854 862 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 SPAG5Q96R06 1193 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 RAD9AQ99638 391 aa5.33□□□□□ -1.56
RNU4-39P-201ENST00000362455 LRRCC1Q9C099 1032 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms