RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DYNC2LI1Q8TCX1 351 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 YIPF6Q96EC8 236 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 HSH2DQ96JZ2 352 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 ZNF641Q96N77 438 aaPredicted RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 C6orf62Q9GZU0 229 aaPredicted RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 ACOT13Q9NPJ3 140 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 THG1LQ9NWX6 298 aaKnown RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 KIF17Q9P2E2 1029 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 CCDC88CQ9P219 2028 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 ILVBLA1L0T0 632 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 KPNA4O00629 521 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 WDR47O94967 919 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 MYCP01106 439 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 POU2F1P14859 743 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 HMGA1P17096 107 aaKnown RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 CCR7P32248 378 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 RPIAP49247 311 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 MADCAM1Q13477 382 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 DOC2BQ14184 412 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 OR2T5Q6IEZ7 315 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 SPATC1Q76KD6 591 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 TMCO2Q7Z6W1 182 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 OR2T29Q8NH02 315 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 APH1BQ8WW43 257 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 LGALS12Q96DT0 336 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 REXO5Q96IC2 774 aaKnown RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 PANX1Q96RD7 426 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 ELOVL6Q9H5J4 265 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 RLIMQ9NVW2 624 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 SCHIP1Q9P0W5 487 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 KIAA1522Q9P206 1035 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 A0A1B0GVM2 712 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 PSMA3P25788 255 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 CRYBA2P53672 197 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 FCGRTP55899 365 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 GPRC6AQ5T6X5 926 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 OR6Q1Q8NGQ2 317 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 YIPF2Q9BWQ6 316 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 SLIRPQ9GZT3 109 aaKnown RBP10.27□□□□□ -0.77
SMC3-201ENST00000361804 QPCTLQ9NXS2 382 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 NAALAD2Q9Y3Q0 740 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 TESMINQ9Y4I5 508 aa10.27□□□□□ -0.77
SMC3-201ENST00000361804 PFDN6O15212 129 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SLC16A6O15403 523 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 MYO1DO94832 1006 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CLDN9O95484 217 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ITGB8P26012 769 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HOXD12P35452 270 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 TGFBR2P37173 567 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CTSOP43234 321 aaPredicted RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 GABARAPL2P60520 117 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 B4GALNT1Q00973 533 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 PTCHD3Q3KNS1 767 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 LRRC66Q68CR7 880 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HORMAD1Q86X24 394 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CLIP4Q8N3C7 705 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 FZD6O60353 706 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 RGS4P49798 205 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 RPS3AP61247 264 aaKnown RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 RPP38P78345 283 aaKnown RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 MAD2L1BPQ15013 274 aaPredicted RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 ATP13A5Q4VNC0 1218 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ADGRF1Q5T601 910 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SHQ1Q6PI26 577 aaKnown RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 ANGPTL8Q6UXH0 198 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 TRIM46Q7Z4K8 759 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 DBF4BQ8NFT6 615 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 AUTS2Q8WXX7 1259 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SH3KBP1Q96B97 665 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 KRT84Q9NSB2 600 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ZNF232Q9UNY5 417 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 GLYATL1P3A0A0U1RQE8 302 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 FAM220BPB1ANY3 271 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CLIC1O00299 241 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SLC28A1O00337 649 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 FPGTO14772 594 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 COQ9O75208 318 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 RETP07949 1114 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ACRV1P26436 265 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SLC19A1P41440 591 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 NR4A2P43354 598 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SNX20Q7Z614 316 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 PTOV1Q86YD1 416 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 TMEM132CQ8N3T6 1108 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 USP7Q93009 1102 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 DUSP21Q9H596 190 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 RAD18Q9NS91 495 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 MYO7AQ13402 2215 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HTR3EA5X5Y0 456 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 KCNK5O95279 499 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms