RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FAM83CQ9BQN1 747 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 IL1RAPQ9NPH3 570 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 MED31Q9Y3C7 131 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 GPC6Q9Y625 555 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 H7BY64 318 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 KLHL18O94889 574 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 DLG1Q12959 904 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 APCDD1Q8J025 514 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 PRAP1Q96NZ9 151 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 TSGA13Q96PP4 275 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 OR2M4Q96R27 311 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 PLEKHA1Q9HB21 404 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 SLC35C2Q9NQQ7 365 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 TVP23BQ9NYZ1 205 aa18.08■□□□□ 0.49
CLIP2-202ENST00000361545 KHNYNO15037 678 aaKnown RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 PCDHGA12O60330 932 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ID2Q02363 134 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 RIPK1Q13546 671 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 RAB33AQ14088 237 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ELOCQ15369 112 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 KBTBD6Q86V97 674 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 OXR1Q8N573 874 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 CADM1Q9BY67 442 aaKnown RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 LRRC3Q9BY71 257 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 JMJD7P0C870 316 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 EPCAMP16422 314 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 GNALP38405 381 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 IRF5Q13568 498 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ELAVL3Q14576 367 aaKnown RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 GLYATL1Q969I3 302 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 KIAA1191Q96A73 305 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ADAM7Q9H2U9 754 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ADAMTSL3P82987 1691 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 H3BQ06 376 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 PEX12O00623 359 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 LAMTOR5O43504 91 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF823P16415 610 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 CLCN4P51793 760 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 OLR1P78380 273 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 XIAPP98170 497 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 PON2Q15165 354 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 TMEM25Q86YD3 366 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 C2CD4AQ8NCU7 369 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 EFHD2Q96C19 240 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 IMP4Q96G21 291 aaKnown RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 MAGEE1Q9HCI5 957 aa18.08■□□□□ 0.48
CLIP2-202ENST00000361545 MKKSQ9NPJ1 570 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-202ENST00000361545 TCEA3O75764 348 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 SLC22A15Q8IZD6 547 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 KCNJ9Q92806 393 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 FIZ1Q96SL8 496 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 SLC39A3Q9BRY0 314 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 FZD3Q9NPG1 666 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 GLOD5A6NK44 160 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 BCHEP06276 602 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 FOSL2P15408 326 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 ZCCHC12Q6PEW1 402 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 LRRTM3Q86VH5 581 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 TRPV3Q8NET8 790 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 SLC29A3Q9BZD2 475 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 TPSD1Q9BZJ3 242 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 P2RX2Q9UBL9 471 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 RGS17Q9UGC6 210 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 RSL24D1Q9UHA3 163 aaKnown RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 COL2A1P02458 1487 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 NUP188Q5SRE5 1749 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 IGLON5A6NGN9 336 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 CHST10O43529 356 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 PAPSS2O95340 614 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 GSTT1P30711 240 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 MNDAP41218 407 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 PPP2R2BQ00005 443 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 POC5Q8NA72 575 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 RBCK1Q9BYM8 510 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 STX16-NPEPL1H3BU86 382 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 STX16O14662 325 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 NADKO95544 446 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 PIM1P11309 404 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-202ENST00000361545 CXCR1P25024 350 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 DNASE1L1P49184 302 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 DEFB103AP81534 67 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 ENPP2Q13822 863 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 OR10H4Q8NGA5 316 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 OR6K6Q8NGW6 343 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 RAB7BQ96AH8 199 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 MRGPRX2Q96LB1 330 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 WDR92Q96MX6 357 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 C17orf62Q9BQA9 187 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 KLRF1Q9NZS2 232 aa18.07■□□□□ 0.48
CLIP2-202ENST00000361545 GSRP00390 522 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 CCINQ13939 588 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 POMPQ9Y244 141 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF860A6NHJ4 632 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 TNFRSF10BO14763 440 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 AGTR2P50052 363 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 ACSBG2Q5FVE4 666 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 SLC2A7Q6PXP3 512 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 KRT74Q7RTS7 529 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms