RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PSMB5P28074 263 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 GRK3P35626 688 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 SEPHS1P49903 392 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 CCR8P51685 355 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 MC2RQ01718 297 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 CDC16Q13042 620 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 RTP5Q14D33 572 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 PDK4Q16654 411 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 ZYG11AQ6WRX3 759 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 EXOC3L1Q86VI1 746 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 TBC1D19Q8N5T2 526 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 BMPERQ8N8U9 685 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 OR4K1Q8NGD4 311 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 OR4K3Q96R72 315 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 SH3GL2Q99962 352 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 DPH7Q9BTV6 452 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 SCNM1Q9BWG6 230 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 OPTCQ9UBM4 332 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 EMCNQ9ULC0 261 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 PCDHGA3Q9Y5H0 932 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 KCNE1BA0A087WTH5 132 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 IGKV1-8A0A0C4DH67 115 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 FAM149AA5PLN7 773 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 EFCAB7A8K855 629 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 A8MT66 165 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 CLGNO14967 610 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 SRPX2O60687 465 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 UGDHO60701 494 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ZWINTO95229 277 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 MYL2P10916 166 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 IMPDH1P20839 514 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 CASP2P42575 452 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 GDF5P43026 501 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 HSPA7P48741 367 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PRKAA2P54646 552 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 CLDN6P56747 220 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 DNAJB13P59910 316 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 HERVK_113P63132 956 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ASPHQ12797 758 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 E2F2Q14209 437 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 TBCCQ15814 346 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ZIC1Q15915 447 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ATG9BQ674R7 924 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 FCRL6Q6DN72 434 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 C16orf46Q6P387 395 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 CEACAM20Q6UY09 585 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PAQR7Q86WK9 346 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 DNAJC22Q8N4W6 341 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 TLCD1Q96CP7 247 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 WDR34Q96EX3 536 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 TAAR9Q96RI9 348 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ZFYVE21Q9BQ24 234 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 DDA1Q9BW61 102 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 ERVK-6Q9BXR3 956 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 SLC6A20Q9NP91 592 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 COPG2Q9UBF2 871 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PILRAQ9UKJ1 303 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
NSMCE1-201ENST00000361439 PTPRBP23467 1997 aa13.27□□□□□ -0.28
NSMCE1-201ENST00000361439 G3V2L1 256 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 H7BY64 318 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 E2F3O00716 465 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 POLR1CO15160 346 aaPredicted RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 DLX3O60479 287 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 CCNT2O60583 730 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 H2AFYO75367 372 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 FGF3P11487 239 aaPredicted RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 FGF5P12034 268 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 CPA3P15088 417 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 PVRP15151 417 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 FOLR1P15328 257 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 GSTM2P28161 218 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 AGTR2P50052 363 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 RPS15AP62244 130 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 TUBB3Q13509 450 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 LAPTM5Q13571 262 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 TCTE1Q5JU00 501 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 DCAF12Q5T6F0 453 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 NXPE2Q96DL1 559 aa13.27□□□□□ -0.29
NSMCE1-201ENST00000361439 PHF21BQ96EK2 531 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms