RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 KELP23276 732 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 ZSWIM7Q19AV6 140 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 C18orf21Q32NC0 220 aaPredicted RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 RNF44Q7L0R7 432 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 UXS1Q8NBZ7 420 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 OR4K1Q8NGD4 311 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 OR8J3Q8NGG0 315 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 CCM2Q9BSQ5 444 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SEZ6LQ9BYH1 1024 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 FAM120CQ9NX05 1096 aaKnown RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 XPNPEP2O43895 674 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 MAT2AP31153 395 aaKnown RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 LMAN2Q12907 356 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SPIN4Q56A73 249 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 CLLU1OSQ5K130 101 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 NOXRED1Q6NXP6 359 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 GALNT13Q8IUC8 556 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 CLIP4Q8N3C7 705 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 OR13J1Q8NGT2 312 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 OVCA2Q8WZ82 227 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 C12orf66Q96MD2 445 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 BOCQ9BWV1 1114 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SLCO3A1Q9UIG8 710 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SPATA2Q9UM82 520 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 WBP11Q9Y2W2 641 aaKnown RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 PCDHB3Q9Y5E6 796 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SLC22A1O15245 554 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 RASAL1O95294 804 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 CYBAP13498 195 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 TARDBPQ13148 414 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 IRF5Q13568 498 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 KCTD11Q693B1 232 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 AP3S1Q92572 193 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 ZNF641Q96N77 438 aaPredicted RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 CERS4Q9HA82 394 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 MTRRQ9UBK8 725 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 ZNF30P17039 623 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 PRDX3P30048 256 aaKnown RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 CPOXP36551 454 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 RPS13P62277 151 aaKnown RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 CDK6Q00534 326 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 QPRTQ15274 297 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 KANK2Q63ZY3 851 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 MMAAQ8IVH4 418 aaKnown RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 ANKFN1Q8N957 763 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 OLIG1Q8TAK6 271 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 IPCEF1Q8WWN9 437 aaPredicted RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 RASSF5Q8WWW0 418 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 PRDM8Q9NQV8 689 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 CMTM6Q9NX76 183 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 IL36AQ9UHA7 158 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 LEFTY2O00292 366 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 RPLP0P05388 317 aaKnown RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 LAMP2P13473 410 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 PRAMEF14Q5SWL7 426 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 PRAMEF13Q5VWM6 474 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 LCN8Q6JVE9 175 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 SUSD1Q6UWL2 747 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 TRIM74Q86UV6 250 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 ZFAND4Q86XD8 727 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 FCGR1BQ92637 280 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 TAMM41Q96BW9 452 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 NUS1Q96E22 293 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 C3orf30Q96M34 536 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 BRINP2Q9C0B6 783 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 ARNT2Q9HBZ2 717 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 TRPS1Q9UHF7 1281 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 SAGE2PA6NJ88 616 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 MPZL2O60487 215 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 APODP05090 189 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 FGF4P08620 206 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 DMPKQ09013 629 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 DDI2Q5TDH0 399 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 NPAS3Q8IXF0 933 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.88■□□□□ 0.13
SCAF1-201ENST00000360565 DIRAS2Q96HU8 199 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 TMEM9Q9P0T7 183 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 OARD1Q9Y530 152 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 STRCP1A6NGW2 1772 aa15.88■□□□□ 0.13
SCAF1-201ENST00000360565 IDH3BO43837 385 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SNX4O95219 450 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 CHRM1P11229 460 aaPredicted RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 IST1P53990 364 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PIGFQ07326 219 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PAGE3Q5JUK9 113 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 USP30Q70CQ3 517 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 AKAP14Q86UN6 197 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SLC35G5Q96KT7 338 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SMIM14Q96QK8 99 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 MGME1Q9BQP7 344 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PDYNP01213 254 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 C9P02748 559 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 TAS2R50P59544 299 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 RAB39AQ14964 217 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 IQCCQ4KMZ1 466 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PGM2L1Q6PCE3 622 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LAPTM4BQ86VI4 370 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms