RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CACUL1Q86Y37 369 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 VRK3Q8IV63 474 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 ELSPBP1Q96BH3 223 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 WRAP53Q9BUR4 548 aaKnown RBP18.06■□□□□ 0.48
SNX11-201ENST00000359238 PRO3102Q9H379 93 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 ZNF229Q9UJW7 825 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 PCDHB1Q9Y5F3 818 aa18.06■□□□□ 0.48
SNX11-201ENST00000359238 UPK3BL1B0FP48 263 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 UPK3BL2E5RIL1 263 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 M0QX08 132 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 KLK8O60259 260 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 GABARAPO95166 117 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 S100BP04271 92 aaPredicted RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 RPS17P08708 135 aaKnown RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 THRBP10828 461 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 GSK3BP49841 420 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 CLCQ05315 142 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 COQ5Q5HYK3 327 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 PAGE2BQ5JRK9 111 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 C9orf64Q5T6V5 341 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 BRAT1Q6PJG6 821 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 GPSM1Q86YR5 675 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 OR52B6Q8NGF0 335 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 DGCR6LQ9BY27 220 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 TRIM54Q9BYV2 358 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 PCTPQ9UKL6 214 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 PDE10AQ9Y233 779 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 BTRCQ9Y297 605 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 VCANP13611 3396 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 H3BQ06 376 aaPredicted RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 SGTAO43765 313 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 GP2P55259 537 aaKnown RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 DAG1Q14118 895 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 HIST2H2ACQ16777 129 aaPredicted RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 DPY19L1Q2PZI1 675 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 LRIT3Q3SXY7 679 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 ZNF805Q5CZA5 627 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 C6orf141Q5SZD1 244 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 SLX4IPQ5VYV7 408 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 SCIMPQ6UWF3 145 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 OR7A2PQ8NGA2 310 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 PHF10Q8WUB8 498 aaKnown RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 TMEM125Q96AQ2 219 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 ARRDC3Q96B67 414 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 RIOK2Q9BVS4 552 aaKnown RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 TRMT61BQ9BVS5 477 aaKnown RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 TP63Q9H3D4 680 aaPredicted RBP18.05■□□□□ 0.48
SNX11-201ENST00000359238 CD274Q9NZQ7 290 aa18.05■□□□□ 0.48
SNX11-201ENST00000359238 TMEM202A6NGA9 273 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 TNFRSF10AO00220 468 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 E2F3O00716 465 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 NADKO95544 446 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 IL7RP16871 459 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 VIPR1P32241 457 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 GDF5P43026 501 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 POLR2LP62875 67 aaKnown RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 TOP3AQ13472 1001 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 ARHGEF7Q14155 803 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 GPR33Q49SQ1 333 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 OTUD3Q5T2D3 398 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 MACC1Q6ZN28 852 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 SYVN1Q86TM6 617 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 MIER2Q8N344 545 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 C19orf60Q96EN9 201 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 AURKBQ96GD4 344 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 TRMOQ9BU70 441 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 CHID1Q9BWS9 393 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ALG2Q9H553 416 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 NECTIN3Q9NQS3 549 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ZDHHC3Q9NYG2 299 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 DKK3Q9UBP4 350 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 FAM8A1Q9UBU6 413 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 NAALAD2Q9Y3Q0 740 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 SNX5Q9Y5X3 404 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ZFC3H1O60293 1989 aaKnown RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 TSPAN11A1L157 253 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ISPDA4D126 451 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 CENPBD1B2RD01 187 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 M0R3G1 203 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 AREL1O15033 823 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 NDUFS2O75306 463 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 KAT7O95251 611 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ALPLP05186 524 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 IL12RB1P42701 662 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 YBX1P67809 324 aaKnown RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 EIF4HQ15056 248 aaKnown RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 CRY1Q16526 586 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ZXDCQ2QGD7 858 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 HNRNPA1L2Q32P51 320 aaKnown RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 SMUG1Q53HV7 270 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 TTC23Q5W5X9 447 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 GALNT13Q8IUC8 556 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 ZBTB2Q8N680 514 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 SMRP1Q8NCR6 262 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 CHDHQ8NE62 594 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 RDH12Q96NR8 316 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 COPS8Q99627 209 aa18.04■□□□□ 0.48
SNX11-201ENST00000359238 KCTD14Q9BQ13 255 aaPredicted RBP18.04■□□□□ 0.48
SNX11-201ENST00000359238 AKTIPQ9H8T0 292 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms