RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ATP1B2P14415 290 aaPredicted RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 CA8P35219 290 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 OPRL1P41146 370 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 SPINT3P49223 89 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 DAPP51397 102 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 VLDLRP98155 873 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 MTAPQ13126 283 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 UGT8Q16880 541 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 VMACQ2NL98 169 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 MPP7Q5T2T1 576 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CCDC81Q6ZN84 652 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 GAREM2Q75VX8 874 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 PIWIL3Q7Z3Z3 882 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 ANKRD13BQ86YJ7 626 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ZZZ3Q8IYH5 903 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 TCEAL8Q8IYN2 117 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CPXM2Q8N436 756 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 FAR1Q8WVX9 515 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 RORBQ92753 470 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ZNF558Q96NG5 402 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 MYOCQ99972 504 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 BRD9Q9H8M2 597 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CHCHD3Q9NX63 227 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 RPS6KA6Q9UK32 745 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 TMPRSS11EQ9UL52 423 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 SAMHD1Q9Y3Z3 626 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 GMPPBQ9Y5P6 360 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 DENND4CQ5VZ89 1909 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 CPSF4O95639 269 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 MPC1LP0DKB6 136 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 JUPP14923 745 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ACPPP15309 386 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 GJA1P17302 382 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 EFNA1P20827 205 aaPredicted RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 HLA-FP30511 346 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 DNAJA1P31689 397 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 MAP2K4P45985 399 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 TRPC1P48995 793 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CLK3P49761 638 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 AP1S2P56377 157 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 RAB15P59190 212 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 IRF8Q02556 426 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 KEAP1Q14145 624 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CTF1Q16619 201 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 RGS21Q2M5E4 152 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 KDM4DQ6B0I6 523 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CAPN13Q6MZZ7 669 aaPredicted RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 DPY19L3Q6ZPD9 716 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 HTR3DQ70Z44 454 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 IGFN1Q86VF2 1251 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 CLECL1Q8IZS7 167 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 SLC39A11Q8N1S5 342 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ELMOD1Q8N336 334 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 PARP8Q8N3A8 854 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 TMCO5AQ8N6Q1 288 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ATG16L2Q8NAA4 619 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ELMO1Q92556 727 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 MTERF1Q99551 399 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 HERC2P3Q9BVR0 1158 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 ASPSCR1Q9BZE9 553 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 SMG9Q9H0W8 520 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 PCDH12Q9NPG4 1184 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 PDP1Q9P0J1 537 aaPredicted RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 ERVK-18Q9QC07 812 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 COQ6Q9Y2Z9 468 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 NPIPB8E9PQR5 432 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 GABARAPO95166 117 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 KCNK5O95279 499 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 CD22P20273 847 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 FPR1P21462 350 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 FSHRP23945 695 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ALDH4A1P30038 563 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 IDUAP35475 653 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PFN3P60673 137 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 GSTM4Q03013 218 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 OCA2Q04671 838 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 DGCR6Q14129 220 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 XKR6Q5GH73 641 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PLEKHS1Q5SXH7 462 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ZDHHC20Q5W0Z9 365 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ERICH5Q6P6B1 374 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 Q6ZVU0 165 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 CHPT1Q8WUD6 406 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 APOL4Q9BPW4 351 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 RHNO1Q9BSD3 238 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SCN3BQ9NY72 215 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 HS3ST2Q9Y278 367 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TPRKBQ9Y3C4 175 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 COL4A6Q14031 1691 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 GFYI3L273 518 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 M0QX08 132 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TOR1BO14657 336 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SLC16A5O15375 505 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms