RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ALDH7A1P49419 539 aaKnown RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 KRR1Q13601 381 aaKnown RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 DGCR6Q14129 220 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 PGS1Q32NB8 556 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 LAIR1Q6GTX8 287 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 LINGO4Q6UY18 593 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 NXPE1Q8N323 547 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CLDN19Q8N6F1 224 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 ATG16L2Q8NAA4 619 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 MAPRE3Q9UPY8 281 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CORO2BQ9UQ03 480 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 MAN1A2O60476 641 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 CYP4B1P13584 511 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 GATMP50440 423 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 CAMK2GQ13555 558 aaPredicted RBP17.19■□□□□ 0.34
RTN4-204ENST00000357732 INAVAQ3KP66 663 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 ZCCHC8Q6NZY4 707 aaKnown RBP17.19■□□□□ 0.34
RTN4-204ENST00000357732 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 PAGE2Q7Z2X7 111 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 ZNF551Q7Z340 670 aaPredicted RBP17.19■□□□□ 0.34
RTN4-204ENST00000357732 DCAF4L2Q8NA75 395 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
RTN4-204ENST00000357732 FBXO22Q8NEZ5 403 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 OR8J2Q8NGG1 315 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 MYDGFQ969H8 173 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 TXNDC15Q96J42 360 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 TSSK3Q96PN8 268 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 BARD1Q99728 777 aaKnown RBP17.19■□□□□ 0.34
RTN4-204ENST00000357732 TMEM165Q9HC07 324 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 ARL15Q9NXU5 204 aa17.19■□□□□ 0.34
RTN4-204ENST00000357732 ALPIP09923 528 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 AMD1P17707 334 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 PPIBP23284 216 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 PTX3P26022 381 aaPredicted RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 LSM3P62310 102 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 VLDLRP98155 873 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 FBXO43Q4G163 708 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 TMEM236Q5W0B7 351 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 USP43Q70EL4 1123 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 SLC22A16Q86VW1 577 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 AMER2Q8N7J2 671 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 HPS1Q92902 700 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 PANX1Q96RD7 426 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 SLC12A9Q9BXP2 914 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 NXF2Q9GZY0 626 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 DCSTAMPQ9H295 470 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 THUMPD1Q9NXG2 353 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 MAGEB17A8MXT2 336 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 WBP4O75554 376 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 CLK1P49759 484 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 RPP38P78345 283 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 IL1RL1Q01638 556 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 ZNF45Q02386 682 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 PRKCZQ05513 592 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 SP140Q13342 867 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 CDKN3Q16667 212 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 METTL3Q86U44 580 aaKnown RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 ANKRD46Q86W74 232 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 P3H2Q8IVL5 708 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 CCDC97Q96F63 343 aaPredicted RBP17.18■□□□□ 0.34
RTN4-204ENST00000357732 GPRC5BQ9NZH0 403 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 OR51B4Q9Y5P0 310 aa17.18■□□□□ 0.34
RTN4-204ENST00000357732 METTL15A6NJ78 407 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 NT5C1B-RDH14C9J2C7 533 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 FPGTO14772 594 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 SLC16A5O15375 505 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 UGDHO60701 494 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 PTTG1O95997 202 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 BPIP17213 487 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 ENGP17813 658 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 ALDH4A1P30038 563 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 SLC6A12P48065 614 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 BCL2L1Q07817 233 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 CSTF3Q12996 717 aaKnown RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 DNASE1L3Q13609 305 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 NOXRED1Q6NXP6 359 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 TMEM53Q6P2H8 277 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 HSH2DQ96JZ2 352 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 LYSMD1Q96S90 227 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 TRPM5Q9NZQ8 1165 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 CCDC59Q9P031 241 aaKnown RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 PADI2Q9Y2J8 665 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 PCDHGB3Q9Y5G1 929 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 PABPN1LA6NDY0 278 aaKnown RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 AGAP5A6NIR3 686 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 HIST1H2AGP0C0S8 130 aaPredicted RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 HIST1H2ADP20671 130 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 TACR1P25103 407 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 SLC14A1Q13336 389 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 OR4F3Q6IEY1 312 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 TPGS1Q6ZTW0 290 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 PTOV1Q86YD1 416 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 LYSMD2Q8IV50 215 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 ENTHD1Q8IYW4 607 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 HJURPQ8NCD3 748 aaPredicted RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 CHAC2Q8WUX2 184 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 MTFMTQ96DP5 389 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms