RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SLC13A3Q8WWT9 602 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SMPDL3AQ92484 453 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 THRSPQ92748 146 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 RPL10LQ96L21 214 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 CMKLR1Q99788 373 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 HSD17B14Q9BPX1 270 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SLC29A3Q9BZD2 475 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SUV39H2Q9H5I1 410 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MRM3Q9HC36 420 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PNPOQ9NVS9 261 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GRHPRQ9UBQ7 328 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 EGFL7Q9UHF1 273 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 POU2F3Q9UKI9 436 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHGC4Q9Y5F7 938 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ADAMTS7Q9UKP4 1686 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 E7EQ34 232 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GADD45GO95257 159 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MT-ND5P03915 603 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ITGB5P18084 799 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 OXTRP30559 389 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ARL2P36404 184 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 LIMK2P53671 638 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 FOLH1Q04609 750 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF234Q14588 700 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 IDNKQ5T6J7 187 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GPR107Q5VW38 600 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 TNFAIP8L2Q6P589 184 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 RALGPS2Q86X27 583 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SPPL2CQ8IUH8 684 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF100Q8IYN0 542 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 C17orf50Q8WW18 174 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ERVK-5Q9HDB9 667 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZDHHC3Q9NYG2 299 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 FNIP2Q9P278 1114 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 FZD10Q9ULW2 581 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 Q9Y3F1 56 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MYH10P35580 1976 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ATP6V1G1O75348 118 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 USP2O75604 605 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 KLF8O95600 359 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 STOMP27105 288 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 RPS3AP61247 264 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PRAMEF17Q5VTA0 474 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 NOXRED1Q6NXP6 359 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MTMR14Q8NCE2 650 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 OR52E4Q8NGH9 312 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 NAT14Q8WUY8 206 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GTPBP3Q969Y2 492 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SCLYQ96I15 445 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 B3GNT5Q9BYG0 378 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SDCBP2Q9H190 292 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 DPEP3Q9H4B8 488 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ACP6Q9NPH0 428 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 C12orf4Q9NQ89 552 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF221Q9UK13 617 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 CYP8B1Q9UNU6 501 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PLLPQ9Y342 182 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 TESMINQ9Y4I5 508 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 A0A1B0GVI7 797 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 NPIPA2E9PIF3 369 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 NPIPA3F8WFD2 350 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SLC7A4O43246 635 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 TPST2O60704 377 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF12P17014 697 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 RBM34P42696 430 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF84P51523 738 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 S100A10P60903 97 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ARF3P61204 181 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ARF1P84077 181 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 EML3Q32P44 896 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PTPN20Q4JDL3 420 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 LRRC73Q5JTD7 316 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 PDE12Q6L8Q7 609 aaKnown RBP5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MON1BQ7L1V2 547 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 AMIGO2Q86SJ2 522 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MFSD3Q96ES6 412 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 P2RY13Q9BPV8 354 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 KCNH6Q9H252 994 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 CNTN3Q9P232 1028 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 TAC3Q9UHF0 121 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 UTS2RQ9UKP6 389 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 FAM240BA0A1B0GVZ2 78 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 C5orf51A6NDU8 294 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 OR2AT4A6NND4 320 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 HSPA12AO43301 675 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SYPP08247 313 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 HERV-K104P61576 105 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 TUBB3Q13509 450 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 ARFRP1Q13795 201 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 HNRNPDQ14103 355 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 MAD2L1BPQ15013 274 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SYT16Q17RD7 645 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 JOSD2Q8TAC2 188 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 BPIFB1Q8TDL5 484 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SPOCK2Q92563 424 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 U3KQV3 271 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1W2PPL8 197 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 KLRG2A4D1S0 409 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 CCNE2O96020 404 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms