RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 WDR26Q9H7D7 661 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 RNPEPL1Q9HAU8 725 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 PRR5-ARHGAP8B1AHC4 643 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 AGPSO00116 658 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 OGNP20774 298 aaKnown RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 CLCN4P51793 760 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 ARHGAP8P85298 464 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 TUBGCP5Q96RT8 1024 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 DLDP09622 509 aaKnown RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 CTBP2P56545 445 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 OAZ1P54368 228 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 MTPNP58546 118 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 DNAJB7Q7Z6W7 309 aaPredicted RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 LIX1LQ8IVB5 337 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 PHTF2Q8N3S3 785 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 MSLNLQ96KJ4 702 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SCGB3A2Q96PL1 93 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SSX3Q99909 188 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 NELFAQ9H3P2 528 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 IL20RAQ9UHF4 553 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 PDYNP01213 254 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 STOMP27105 288 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 NAA20P61599 178 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 PDK4Q16654 411 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF100Q8IYN0 542 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 KREMEN2Q8NCW0 462 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 HNRNPLLQ8WVV9 542 aaKnown RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SCGB2A1O75556 95 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 NDST3O95803 873 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 GNAZP19086 355 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 RHEBQ15382 184 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 VWA5B1Q5TIE3 1220 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 RCBTB1Q8NDN9 531 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 OR5B17Q8NGF7 314 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 COL21A1Q96P44 957 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 MAN2B2Q9Y2E5 1009 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 TCRBV9S1A1TA0A576 114 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 ISPDA4D126 451 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 RORCP51449 518 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 GHRHRQ02643 423 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 MFSD13AQ14CX5 517 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 LPAL2Q16609 132 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 NUP214P35658 2090 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 GLOD5A6NK44 160 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 ADAMDEC1O15204 470 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 ADAP00813 363 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 OR2T34Q8NGX1 318 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 OR2T3Q8NH03 318 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 SPPL2BQ8TCT7 592 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 NANSQ9NR45 359 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF705EA8MWA4 302 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 ERI3O43414 337 aaKnown RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 OR4F21O95013 312 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 OTX2P32243 289 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 VARS2Q5ST30 1063 aaKnown RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 AMBNQ9NP70 447 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 PRLP01236 227 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 POLR2HP52434 150 aaKnown RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 GNA12Q03113 381 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 CARD16Q5EG05 197 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 GLIS3Q8NEA6 775 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 A0A1W2PQ45 241 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 A0A1W2PQY0 241 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 CCNE2O96020 404 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 E2F1Q01094 437 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 SLC35F1Q5T1Q4 408 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 REP15Q6BDI9 236 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 CPNE2Q96FN4 548 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 SLC35A5Q9BS91 424 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 DENND2DQ9H6A0 471 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-201ENST00000356083 USP29Q9HBJ7 922 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 APOL3O95236 402 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 UGT1A3P35503 534 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 CLNKQ7Z7G1 428 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 RGMAQ96B86 450 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 GRHPRQ9UBQ7 328 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 SEC16AO15027 2179 aa16.84■□□□□ 0.29
COL27A1-201ENST00000356083 JUPP14923 745 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 CRHR2Q13324 411 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 TUSC3Q13454 348 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 TIGD6Q17RP2 521 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 PRR11Q96HE9 360 aaPredicted RBP16.83■□□□□ 0.29
COL27A1-201ENST00000356083 ARL5BQ96KC2 179 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 SPIN1Q9Y657 262 aaPredicted RBP16.83■□□□□ 0.29
COL27A1-201ENST00000356083 A0A1W2PPM1 405 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms