RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SLC6A14Q9UN76 642 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 FAM227AF5H4B4 570 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 INSIG1O15503 277 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TNFRSF21O75509 655 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TSPAN12O95859 305 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 IL6P05231 212 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 PRR35P0CG20 571 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 SOX3P41225 446 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 ELP6Q0PNE2 266 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 BCL2A1Q16548 175 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 MANEALQ5VSG8 457 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 KBTBD8Q8NFY9 601 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 OR5AK3PQ8NH89 298 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 APIPQ96GX9 242 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 BTN2A3PQ96KV6 586 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 FBXO8Q9NRD0 319 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 HEBP1Q9NRV9 189 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 SBF1O95248 1867 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 GNG14A0A1W2PPG7 69 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 FZD9O00144 591 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 HAS3O00219 553 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TMCC2O75069 709 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TACR2P21452 398 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 RHOAP61586 193 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 RUNX1T1Q06455 604 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 SMU1Q2TAY7 513 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 CCDC58Q4VC31 144 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 IRAK1BP1Q5VVH5 260 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 CCDC71Q8IV32 467 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-203ENST00000355947 LMNTD1Q8N9Z9 388 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 MED8Q96G25 268 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 RDH12Q96NR8 316 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-203ENST00000355947 NLE1Q9NVX2 485 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-203ENST00000355947 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 TNPO3Q9Y5L0 923 aaKnown RBP13.22□□□□□ -0.29
TRIM4-203ENST00000355947 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
TRIM4-203ENST00000355947 GFRA2O00451 464 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 MANBAO00462 879 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 KMOO15229 486 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 HOXB8P17481 243 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 FPR1P21462 350 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 NDUFA5Q16718 116 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 SYT6Q5T7P8 510 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 RNF219Q5W0B1 726 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 ERAP2Q6P179 960 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 KLHL17Q6TDP4 642 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 PAMR1Q6UXH9 720 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 SLC5A8Q8N695 610 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 NELL1Q92832 810 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 VPS35Q96QK1 796 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 CCM2Q9BSQ5 444 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 CDADC1Q9BWV3 514 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 DUSP21Q9H596 190 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 CCNB1IP1Q9NPC3 277 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 NUDT4Q9NZJ9 180 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 RNF181Q9P0P0 153 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TLR6Q9Y2C9 796 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 PRSS21Q9Y6M0 314 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 METTL15A6NJ78 407 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 H3BN98 237 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 SMLR1H3BR10 107 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TPST2O60704 377 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 STK16O75716 305 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 NFE2L1Q14494 772 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.29
TRIM4-203ENST00000355947 HMGN2P46Q86SG4 172 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 RAB43Q86YS6 212 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 DHRS1Q96LJ7 313 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TCF25Q9BQ70 676 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TMEM248Q9NWD8 314 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 TMEM161AQ9NX61 479 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 PADI3Q9ULW8 664 aa13.21□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.21□□□□□ -0.3
TRIM4-203ENST00000355947 OR2A25A4D2G3 310 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 SAGE2PA6NJ88 616 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 F2P00734 622 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 KDELR2P33947 212 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 RYKP34925 604 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 CSTF3Q12996 717 aaKnown RBP13.21□□□□□ -0.3
TRIM4-203ENST00000355947 DUSP4Q13115 394 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 ZNF177Q13360 481 aaPredicted RBP13.21□□□□□ -0.3
TRIM4-203ENST00000355947 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 BCDIN3DQ7Z5W3 292 aaKnown RBP13.21□□□□□ -0.3
TRIM4-203ENST00000355947 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.3
TRIM4-203ENST00000355947 PJA1Q8NG27 643 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms