RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 RAPSNQ13702 412 aa13.39□□□□□ -0.27
EBF3-201ENST00000355311 RIMKLAQ8IXN7 391 aa13.39□□□□□ -0.27
EBF3-201ENST00000355311 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
EBF3-201ENST00000355311 ZNF548Q8NEK5 533 aaPredicted RBP13.39□□□□□ -0.27
EBF3-201ENST00000355311 ZNF296Q8WUU4 475 aaPredicted RBP13.39□□□□□ -0.27
EBF3-201ENST00000355311 FAM118AQ9NWS6 357 aa13.39□□□□□ -0.27
EBF3-201ENST00000355311 CFAP20Q9Y6A4 193 aaKnown RBP13.39□□□□□ -0.27
EBF3-201ENST00000355311 HIST1H2AGP0C0S8 130 aaPredicted RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 CDH1P12830 882 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CSF2RAP15509 400 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HIST1H2ADP20671 130 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 S100A1P23297 94 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PPP3CCP48454 512 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CLCN4P51793 760 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PCBP2Q15366 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
EBF3-201ENST00000355311 INAQ16352 499 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HKDC1Q2TB90 917 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 XKR6Q5GH73 641 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PSMA8Q8TAA3 256 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 NDNFQ8TB73 568 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 SH3KBP1Q96B97 665 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HIST1H2AHQ96KK5 128 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HIST1H2AJQ99878 128 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 H2AFJQ9BTM1 129 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 REXO4Q9GZR2 422 aaKnown RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 ABCB10Q9NRK6 738 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 C1orf109Q9NX04 203 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 VPS9D1Q9Y2B5 631 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 WNT6Q9Y6F9 365 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 GREM1O60565 184 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 ETHE1O95571 254 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 SERPINA4P29622 427 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CYP4F2P78329 520 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CATSPEREQ5SY80 951 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CACTIN-AS1Q8N1I8 211 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 OR2AP1Q8NGE2 309 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 BPIFB1Q8TDL5 484 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 OSCP1Q8WVF1 389 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PEX13Q92968 403 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 ZFYVE19Q96K21 471 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PAK1IP1Q9NWT1 392 aaPredicted RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 ACSL6Q9UKU0 697 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HOXB8P17481 243 aaPredicted RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 SDC1P18827 310 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 CTSCP53634 463 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 VBP1P61758 197 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 MC1RQ01726 317 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 KIAA0040Q15053 153 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 FAM214AQ32MH5 1076 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 MMP21Q8N119 569 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 ZNF347Q96SE7 839 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 SCHIP1Q9P0W5 487 aaPredicted RBP13.38□□□□□ -0.27
EBF3-201ENST00000355311 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 OARD1Q9Y530 152 aa13.38□□□□□ -0.27
EBF3-201ENST00000355311 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 WASH3PC4AMC7 463 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 E7EQ34 232 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 LAMP1P11279 417 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ALDH3A2P51648 485 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ADARB1P78563 741 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 IRF8Q02556 426 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 MADCAM1Q13477 382 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 STARD3Q14849 445 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ATAD3BQ5T9A4 648 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 CYP4Z1Q86W10 505 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 SYT12Q8IV01 421 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 C8orf59Q8N0T1 100 aaPredicted RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 FATE1Q969F0 183 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 CTRCQ99895 268 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 SORBS1Q9BX66 1292 aaKnown RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 HEBP1Q9NRV9 189 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ERVK-18Q9QC07 812 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 MAGEL2Q9UJ55 1249 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
EBF3-201ENST00000355311 LEFTY2O00292 366 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ABLIM3O94929 683 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 IGSF6O95976 241 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 BMP4P12644 408 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 HLA-EP13747 358 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 ENGP17813 658 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 CD22P20273 847 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 BMPR1AP36894 532 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 NUDT6P53370 316 aa13.37□□□□□ -0.27
EBF3-201ENST00000355311 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms