RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LEFTY2O00292 366 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 AHSGP02765 367 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 GBAP04062 536 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF613Q6PF04 617 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 QSOX2Q6ZRP7 698 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 GOLGA7Q7Z5G4 137 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 NID2Q14112 1375 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 KDELR3O43731 214 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 GKP32189 559 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 GGT5P36269 586 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 RAB30Q15771 203 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ARHGAP40Q5TG30 622 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 RASGEF1AQ8N9B8 481 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SMOQ99835 787 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 POLR2J2Q9GZM3 115 aaKnown RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SP140LQ9H930 580 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 EI24O14681 340 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 PDCD5O14737 125 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 CNTN5O94779 1100 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 HAPLN1P10915 354 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 CYP27C1Q4G0S4 372 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 OLFML1Q6UWY5 402 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 AMIGO1Q86WK6 493 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 OR4F6Q8NGB9 312 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 NCSTNQ92542 709 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 LRRC58Q96CX6 371 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 KLRF1Q9NZS2 232 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SCNN1AP37088 669 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 MLLT6P55198 1093 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ADAM8P78325 824 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 DSC3Q14574 896 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SLC2A7Q6PXP3 512 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 LGI4Q8N135 537 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF676Q8N7Q3 588 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SLC39A3Q9BRY0 314 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 MOCS1Q9NZB8 636 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 FETUBQ9UGM5 382 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 RPL36Q9Y3U8 105 aaKnown RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 SPIN1Q9Y657 262 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-202ENST00000355133 MTMR11A4FU01 709 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF99A8MXY4 864 aaPredicted RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 H3BNX3 289 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PMM2O15305 246 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 INMTO95050 263 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 KCNJ5P48544 419 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 LIN52Q52LA3 116 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SETD7Q8WTS6 366 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SMPDL3AQ92484 453 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 IL4I1Q96RQ9 567 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SLC45A1Q9Y2W3 748 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 CDH1P12830 882 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF3P17036 446 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TYRP1P17643 537 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 OGDHQ02218 1023 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 KCNJ11Q14654 390 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 C10orf82Q8WW14 230 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PIK3R3Q92569 461 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 OR52B2Q96RD2 323 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 KAT8Q9H7Z6 458 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SCDO00767 359 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 KCNE1P15382 129 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 MAP3K8P41279 467 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 GBX2P52951 348 aaPredicted RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TPRG1Q6ZUI0 275 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 RPS27LQ71UM5 84 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SYVN1Q86TM6 617 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SHDQ96IW2 340 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SLIT2O94813 1529 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 FABP12A6NFH5 140 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 RPP14O95059 124 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 AP1S2P56377 157 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TNFAIP8L3Q5GJ75 292 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 ANO7Q6IWH7 933 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 KLHL36Q8N4N3 616 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TMEM156Q8N614 296 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 THUMPD1Q9NXG2 353 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 MANBAO00462 879 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SLC22A2O15244 555 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 DLX3O60479 287 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms